BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
10213at6073Complete271.5161.0agem_s0016.g218.t1CB1 cannabinoid receptor-interacting protein 1JBrowse
10225at6073Complete299.3202.0agem_s0118.g29.t2nucleoside diphosphate-linked moiety X motif 8-likeJBrowse
10231at6073Complete1018.9623.0agem_s0148.g9.t1alkylated DNA repair protein alkB homolog 8-likeJBrowse
10260at6073Complete787.3424.0agem_s0152.g54.t1probable aminopeptidase NPEPL1JBrowse
10283at6073Complete1194.7613.0agem_s0032.g131.t1solute carrier organic anion transporter family member 4A1-likeJBrowse
10348at6073Complete321.0178.0agem_s0046.g39.t1Pancreas transcription factor 1 subunit alphaJBrowse
10369at6073Complete553.1218.0agem_s0161.g1.t2nucleoside diphosphate kinase homolog 5JBrowse
10403at6073Complete1231.0698.0agem_s0015.g144.t1Serine/threonine-protein kinase sik2JBrowse
10404at6073Complete4456.32302.0agem_s0314.g15.t1CCR4-NOT transcription complex subunit 1JBrowse
10411at6073Complete504.2320.0agem_s0032.g68.t1CST complex subunit STN1-likeJBrowse
10506at6073Complete583.3351.0agem_s0002.g443.t1LIM/homeobox protein Lhx1-likeJBrowse
10512at6073Complete491.0252.0agem_s0013.g187.t1plasmanylethanolamine desaturaseJBrowse
10571at6073Complete574.0387.0agem_s0007.g12.t1suppressor APC domain-containing protein 2-likeJBrowse
10748at6073Duplicated592.5321.0agem_s0055.g52.t2cytosolic arginine sensor for mTORC1 subunit 1-likeJBrowse
10748at6073Duplicated565.2321.0agem_s0055.g52.t1cytosolic arginine sensor for mTORC1 subunit 1-likeJBrowse
10822at6073Complete342.7191.0agem_s0042.g15.t1hematopoietically-expressed homeobox protein hhexJBrowse
10935at6073Complete308.8239.0agem_s0002.g375.t1uncharacterized protein LOC114960186JBrowse
10942at6073Complete462.2282.0agem_s0295.g3.t1hsp70-binding protein 1JBrowse
10960at6073Complete1157.3611.0agem_s0059.g126.t1collagen type IV alpha-3-binding proteinJBrowse
10961at6073Complete1014.3509.0agem_s0303.g10.t1amidophosphoribosyltransferaseJBrowse
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