BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7235at6073Duplicated1580.0882.0XP_074614131.1phospholipase D1-likeJBrowse
7235at6073Duplicated1580.0882.0XP_074614132.1phospholipase D1-likeJBrowse
7235at6073Duplicated1500.5850.0XP_074614135.1phospholipase D1-likeJBrowse
7235at6073Duplicated1480.1846.0XP_074614134.1phospholipase D1-likeJBrowse
7248at6073Complete2040.51061.0XP_074620562.1WD repeat-containing protein 49JBrowse
7269at6073Complete1274.2744.0XP_074622185.1chondroitin sulfate synthase 2JBrowse
7275at6073Complete583.1320.0XP_074639704.1zinc transporter ZIP11-likeJBrowse
7304at6073Complete452.6304.0XP_074635956.1Aspartate beta-hydroxylase domain-containing 2JBrowse
7306at6073Complete847.6433.0XP_074636435.1EH domain-containing protein 1-likeJBrowse
7334at6073Complete532.5333.0XP_074630162.1glutaminyl-peptide cyclotransferase-likeJBrowse
7342at6073Complete723.4372.0XP_074630699.12-aminoethylphosphonate--pyruvate transaminase-likeJBrowse
7350at6073Complete914.5509.0XP_074617745.1Importin subunit alpha-1JBrowse
7365at6073Duplicated1073.1641.0XP_074621995.1GATOR complex protein MIOSJBrowse
7365at6073Duplicated1040.2641.0XP_074621997.1GATOR complex protein MIOSJBrowse
7365at6073Duplicated992.2609.0XP_074621998.1GATOR complex protein MIOSJBrowse
7371at6073Complete1146.4743.0XP_074625305.1anaphase-promoting complex subunit 4JBrowse
7404at6073Complete557.1327.0XP_074620084.1cell division cycle protein 123 homologJBrowse
7447at6073Duplicated392.3221.0XP_074606129.13-oxo-5-alpha-steroid 4-dehydrogenaseJBrowse
7447at6073Duplicated392.3221.0XP_074606130.13-oxo-5-alpha-steroid 4-dehydrogenaseJBrowse
7447at6073Duplicated384.4216.0XP_074606131.13-oxo-5-alpha-steroid 4-dehydrogenaseJBrowse
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