BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
6727at6073Duplicated244.3201.0g11469.t1.1Radial spoke head 1JBrowse
6767at6073Fragmented114.876.0BRAKERHOCP00005010651.110 kda heat shock proteinJBrowse
6836at6073Duplicated606.8473.0BRAKERHOCP00005007303.1ATP-dependent RNA helicase DDX41JBrowse
6836at6073Duplicated606.8473.0g1657.t1.1ATP-dependent RNA helicase DDX41JBrowse
6910at6073Fragmented257.2201.0BRAKERHOCP00005005847.1ubiquinol-cytochrome-c reductase complex assembly factor 1JBrowse
6947at6073Duplicated470.9380.0BRAKERHOCP00005016873.1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
6947at6073Duplicated470.9380.0g1024.t1.1tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-likeJBrowse
6963at6073Fragmented120.1200.0BRAKERHOCP00005011419.1aminoacyl tRNA synthase complex-interacting multifunctional protein 2JBrowse
6965at6073Duplicated227.3295.0BRAKERHOCP00005011514.1Histidine protein methyltransferase 1JBrowse
6965at6073Duplicated227.3295.0g15197.t1.1Histidine protein methyltransferase 1JBrowse
6970at6073Duplicated795.1431.0BRAKERHOCP00005013311.1ribosomal protein S6 kinase beta-1JBrowse
6970at6073Duplicated795.1431.0g18825.t1.1ribosomal protein S6 kinase beta-1JBrowse
6982at6073Duplicated314.8260.0BRAKERHOCP00005021075.1alkaline ceramidase 3JBrowse
6982at6073Duplicated314.8260.0g7833.t1.1alkaline ceramidase 3JBrowse
6986at6073Duplicated1003.6539.0BRAKERHOCP00005002960.1EH domain-containing protein 3JBrowse
6986at6073Duplicated1003.6539.0g6640.t1.1EH domain-containing protein 3JBrowse
7023at6073Duplicated380.9317.0BRAKERHOCP00005007761.1serine proteaseJBrowse
7023at6073Duplicated380.9317.0g3879.t1.1serine proteaseJBrowse
7030at6073Duplicated320.3255.0BRAKERHOCP00005008957.150S ribosomal protein L4-likeJBrowse
7030at6073Duplicated320.3255.0g4434.t1.150S ribosomal protein L4-likeJBrowse
Go to page: of 262 pages
TOP