BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76778at6073Duplicated415.1446.0BRAKERHOCP00005011047.1malate dehydrogenase 1BJBrowse
76778at6073Duplicated415.1446.0g14457.t1.1malate dehydrogenase 1BJBrowse
76787at6073Duplicated586.7525.0BRAKERHOCP00005011858.1Far upstream element-binding protein 3JBrowse
76787at6073Duplicated586.7525.0g20483.t1.1Far upstream element-binding protein 3JBrowse
76788at6073Fragmented320.0218.0BRAKERHOCP00005006888.1hsc70-interacting proteinJBrowse
76791at6073Duplicated362.6401.0BRAKERHOCP00005011938.1sedoheptulokinase-likeJBrowse
76791at6073Duplicated362.6401.0g18741.t1.1sedoheptulokinase-likeJBrowse
76792at6073Duplicated429.2326.0BRAKERHOCP00005002923.1STAM-binding protein-likeJBrowse
76792at6073Duplicated429.2326.0g7718.t1.1STAM-binding protein-likeJBrowse
76797at6073Duplicated549.7581.0BRAKERHOCP00005012164.1nuclear pore complex protein Nup88-likeJBrowse
76797at6073Duplicated549.7581.0g18843.t1.1nuclear pore complex protein Nup88-likeJBrowse
76805at6073Duplicated282.8357.0BRAKERHOCP00005014710.1uncharacterized protein LOC130614738 isoform X1JBrowse
76805at6073Duplicated282.8357.0g18248.t1.1uncharacterized protein LOC130614738 isoform X1JBrowse
76820at6073Duplicated604.8412.0BRAKERHOCP00005013259.1pectin acetylesterase 5JBrowse
76820at6073Duplicated604.8412.0g18934.t1.1pectin acetylesterase 5JBrowse
76840at6073Duplicated424.7439.0BRAKERHOCP00005001131.1SHC-transforming protein 1JBrowse
76840at6073Duplicated424.7439.0g5059.t1.1SHC-transforming protein 1JBrowse
76853at6073Duplicated945.81126.0BRAKERHOCP00005003897.1RB1-inducible coiled-coil protein 1JBrowse
76853at6073Duplicated945.81126.0g11520.t1.1RB1-inducible coiled-coil protein 1JBrowse
76855at6073Duplicated332.4315.0BRAKERHOCP00005015335.1Protein kinase C and casein kinase substrate in neuronsJBrowse
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