BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
11629at6073Complete409.3208.0aint_s0083.g59.t140S ribosomal proteinJBrowse
11698at6073Complete583.1317.0aint_s0100.g16.t1WD repeat-containing protein 55JBrowse
11744at6073Complete304.0172.0aint_s0281.g17.t1protein ATP6V1FNB-likeJBrowse
11765at6073Complete532.2276.0aint_s0096.g38.t1ubiquitin-conjugating enzyme E2 Z-likeJBrowse
11802at6073Duplicated968.3523.0aint_s0075.g18.t2mitochondrial-processing peptidase subunit alphaJBrowse
11802at6073Duplicated968.2523.0aint_s0075.g18.t1mitochondrial-processing peptidase subunit alphaJBrowse
11834at6073Complete399.3210.0aint_s0310.g17.t1UPF0428 protein CXorf56JBrowse
11852at6073Complete217.3119.0aint_s0009.g5.t128S ribosomal protein S6, mitochondrial-likeJBrowse
11858at6073Fragmented581.7242.0aint_s0105.g47.t1Casein kinase II subunit alphaJBrowse
11940at6073Complete513.6269.0aint_s0346.g16.t1solute carrier family 35 member E3-likeJBrowse
11943at6073Complete908.3545.0aint_s0099.g87.t1TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5LJBrowse
12015at6073Complete768.8464.0aint_s0160.g23.t1DNA-(apurinic or apyrimidinic site) endonuclease 2JBrowse
12093at6073Complete1328.2721.0aint_s0077.g4.t1tyrosine-protein kinase HTK16JBrowse
12106at6073Complete968.8492.0aint_s0457.g6.t2GATA-binding factor 2-likeJBrowse
12121at6073Complete502.5371.0aint_s0172.g38.t1Ectonucleoside triphosphate diphosphohydrolase 5JBrowse
12142at6073Complete574.5281.0aint_s0079.g26.t1Golgi phosphoprotein 3-likeJBrowse
12150at6073Complete854.6503.0aint_s0060.g18.t1protein smoothened-likeJBrowse
12151at6073Complete1436.9817.0aint_s0101.g88.t1F-box/WD repeat-containing protein 10JBrowse
12222at6073Complete608.4406.0aint_s0035.g61.t1MORN repeat-containing protein 1JBrowse
12286at6073Fragmented978.9669.0aint_s1565.g1.t2integrinJBrowse
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