BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
11315at6073Complete171.576.0alor_g5302.t1small nuclear ribonucleoprotein GJBrowse
11491at6073Complete241.0122.0alor_g13140.t1microtubule-associated proteins 1A/1B light chain 3A-likeJBrowse
11560at6073Complete1328.7796.0alor_g1721.t1serine/threonine-protein phosphatase 4 regulatory subunit 1JBrowse
11581at6073Fragmented174.2104.0alor_g11159.t1ribonuclease P/MRP protein subunit POP5JBrowse
11582at6073Complete314.9172.0alor_g19517.t1ER membrane protein complex subunit 4JBrowse
11624at6073Complete291.4166.0alor_g6107.t1uncharacterized protein LOC116303231JBrowse
11629at6073Complete409.3208.0alor_g6870.t140S ribosomal proteinJBrowse
11698at6073Complete584.9317.0alor_g18100.t1WD repeat-containing protein 55JBrowse
11744at6073Complete304.2172.0alor_g14181.t1protein ATP6V1FNB-likeJBrowse
11765at6073Complete534.1276.0alor_g5327.t1ubiquitin-conjugating enzyme E2 Z-likeJBrowse
11802at6073Complete963.6513.0alor_g16134.t1mitochondrial-processing peptidase subunit alphaJBrowse
11834at6073Complete399.3210.0alor_g2571.t1UPF0428 protein CXorf56JBrowse
11852at6073Complete217.3119.0alor_g6703.t128S ribosomal protein S6, mitochondrial-likeJBrowse
11858at6073Complete820.4373.0alor_g1943.t1Casein kinase II subunit alphaJBrowse
11940at6073Complete513.2269.0alor_g1023.t1solute carrier family 35 member E3-likeJBrowse
11943at6073Complete520.4502.0alor_g7040.t1TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5LJBrowse
12015at6073Complete626.8383.0alor_g16478.t1DNA-(apurinic or apyrimidinic site) endonuclease 2JBrowse
12054at6073Complete253.0144.0alor_g11246.t1glutaredoxin-related 5, mitochondrialJBrowse
12093at6073Complete1331.6721.0alor_g26690.t1tyrosine-protein kinase HTK16JBrowse
12106at6073Complete967.7492.0alor_g12720.t1GATA-binding factor 2-likeJBrowse
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