BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7453at6073Complete175.4103.0XP_074631775.1cytochrome c oxidase assembly protein COX20, mitochondrial-likeJBrowse
7455at6073Duplicated922.1446.0XP_074608483.1stress-activated protein kinase JNK-likeJBrowse
7455at6073Duplicated902.7425.0XP_074608484.1stress-activated protein kinase JNK-likeJBrowse
7455at6073Duplicated900.2418.0XP_074608485.1stress-activated protein kinase JNK-likeJBrowse
7488at6073Duplicated518.6265.0XP_074638534.1hydroxyacylglutathione hydrolase, mitochondrial-likeJBrowse
7488at6073Duplicated518.4265.0XP_074638533.1hydroxyacylglutathione hydrolase, mitochondrial-likeJBrowse
7509at6073Duplicated1168.9704.0XP_074636620.1Trafficking protein particle complex subunit 12JBrowse
7509at6073Duplicated1161.7704.0XP_074636621.1Trafficking protein particle complex subunit 12JBrowse
7509at6073Duplicated1159.1704.0XP_074636622.1Trafficking protein particle complex subunit 12JBrowse
7511at6073Complete964.0535.0XP_074635115.1Meckel syndrome type 1 protein-likeJBrowse
7534at6073Complete187.786.0XP_074609166.1small nuclear ribonucleoprotein FJBrowse
7542at6073Complete1101.8586.0XP_074639673.1Nuclear protein localization protein 4JBrowse
7565at6073Duplicated668.5320.0XP_074613191.1deoxyribose-phosphate aldolaseJBrowse
7565at6073Duplicated668.5320.0XP_074613192.1deoxyribose-phosphate aldolaseJBrowse
7589at6073Duplicated372.7188.0XP_074619277.160S ribosomal protein L9-likeJBrowse
7589at6073Duplicated372.7188.0XP_074619278.160S ribosomal protein L9-likeJBrowse
7596at6073Complete4217.42147.0XP_074626175.1activating signal cointegrator 1 complex subunitJBrowse
7610at6073Complete481.8266.0XP_074612358.1Glutathione S-transferaseJBrowse
7622at6073Duplicated1231.8788.0XP_074610911.1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7622at6073Duplicated1231.0788.0XP_074610910.1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
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