BUSCO Gene Details in Cyphastrea salae

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cyphastrea salaeBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 95.3% [S: 69.6%, D: 25.7%] F: 3.0%, M: 1.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,051 (95.3%)2,229 (69.6%)822 (25.7%)97 (3.0%)55 (1.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cyphastrea salae: 4,072 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8715at6073Duplicated224.9139.0ENSOFVP00000026406.1AP-4 complex subunit sigma-1JBrowse
8718at6073Duplicated1651.7962.0ENSOFVP00000026990.1Ubiquitin conjugation factor E4 BJBrowse
8718at6073Duplicated1635.2961.0ENSOFVP00000026973.1Ubiquitin conjugation factor E4 BJBrowse
8721at6073Complete913.0460.0ENSOFVP00000032449.1N-acetylgalactosamine kinaseJBrowse
8749at6073Duplicated1073.3741.0ENSOFVP00000016026.1epithelial discoidin domain-containing receptor 1JBrowse
8749at6073Duplicated1073.3740.0ENSOFVP00000016032.1epithelial discoidin domain-containing receptor 1JBrowse
8765at6073Fragmented509.3245.0ENSOFVP00000022114.1transaldolaseJBrowse
8767at6073Complete2216.91088.0ENSOFVP00000010049.1importin-5JBrowse
8805at6073Duplicated711.6402.0ENSOFVP00000014256.1potassium voltage-gated channel Shal-likeJBrowse
8805at6073Duplicated696.1378.0ENSOFVP00000014272.1potassium voltage-gated channel Shal-likeJBrowse
8805at6073Duplicated691.8374.0ENSOFVP00000014249.1potassium voltage-gated channel Shal-likeJBrowse
8845at6073Duplicated903.3536.0ENSOFVP00000028879.1early growth response protein 1JBrowse
8845at6073Duplicated860.8494.0ENSOFVP00000028876.1early growth response protein 1JBrowse
8864at6073Fragmented327.4165.0ENSOFVP00000022761.1Cyclin-dependent kinase 5 activator 1JBrowse
8869at6073Complete481.0254.0ENSOFVP00000013311.1Haloacid dehalogenase-like hydrolase domain-containing protein 2JBrowse
8874at6073Complete567.3303.0ENSOFVP00000003594.1regulation of nuclear pre-mRNA domain-containing protein 1BJBrowse
8899at6073Duplicated751.7398.0ENSOFVP00000021255.1transcriptional enhancer factor TEF-1-likeJBrowse
8899at6073Duplicated751.2398.0ENSOFVP00000021250.1transcriptional enhancer factor TEF-1-likeJBrowse
8905at6073Fragmented241.7255.0ENSOFVP00000005138.1protein naked cuticle homolog 2-likeJBrowse
8946at6073Complete240.5125.0ENSOFVP00000018024.1NADH dehydrogenase JBrowse
Go to page: of 204 pages
TOP