BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14048at6073Complete581.1553BRAKERHOCP00005001771.1tyrosine-protein kinase RYK-likeJBrowse
14069at6073Complete646.1732BRAKERHOCP00005020448.1Integrator complex subunit 10JBrowse
14083at6073Complete339.1274BRAKERHOCP00005013105.1ELMO domain-containing protein 2JBrowse
14176at6073Complete272.3245BRAKERHOCP00005002672.1Replication protein A 32 kDa subunitJBrowse
14194at6073Fragmented259.9324BRAKERHOCP00005013532.1uncharacterized protein LOC116294854JBrowse
14205at6073Complete256.1177BRAKERHOCP00005011785.139S ribosomal protein L22, mitochondrial-likeJBrowse
14214at6073Complete733.2431BRAKERHOCP00005007599.1SynaptotagminJBrowse
14256at6073Complete376.9317BRAKERHOCP00005019761.1TAR DNA-binding protein 43JBrowse
14280at6073Complete321.1180BRAKERHOCP00005008336.1malignant T-cell-amplified sequence 1JBrowse
14288at6073Complete454.6477BRAKERHOCP00005006228.1nucleolar complex protein 4 homologJBrowse
14308at6073Complete319.0195BRAKERHOCP00005001714.1thymocyte nuclear protein 1JBrowse
14320at6073Complete350.5452BRAKERHOCP00005010256.1Usher syndrome type-1GJBrowse
14388at6073Complete247.2468BRAKERHOCP00005012683.1protein zwilch homologJBrowse
14433at6073Complete545.4394BRAKERHOCP00005015202.1vacuolar protein sorting-associated protein 4B-likeJBrowse
14446at6073Complete305.2161BRAKERHOCP00005010021.1sorcinJBrowse
14459at6073Complete224.3260BRAKERHOCP00005006381.1exosome complex component RRP43JBrowse
14502at6073Complete319.3368BRAKERHOCP00005004266.1growth/differentiation factor 6-A-likeJBrowse
14507at6073Complete378.7334BRAKERHOCP00005001465.1SynaptotagminJBrowse
14509at6073Complete970.91049BRAKERHOCP00005012098.1Fanconi anemia group JJBrowse
14517at6073Fragmented152.086BRAKERHOCP00005002000.1N-alpha-acetyltransferase 20JBrowse
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