BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
12784at6073Duplicated515.2410.0HOLI04687.G31542T-complex protein 11JBrowse
12784at6073Duplicated512.7410.0HOLI00206.G7622T-complex protein 11JBrowse
12845at6073Fragmented429.6243.0HOLI00437.G48563protein YIPF1-likeJBrowse
12900at6073Complete339.1388.0HOLI00049.G366uncharacterized protein LOC122946992JBrowse
12912at6073Complete1858.3942.0HOLI00240.G5521coatomer subunit betaJBrowse
12919at6073Complete402.5271.0HOLI01231.G25343protein-S-isoprenylcysteine O-methyltransferase-likeJBrowse
12980at6073Complete806.7746.0HOLI00294.G58173uncharacterized protein LOC114955734 isoform X1JBrowse
12994at6073Complete478.3301.0HOLI00156.G47471ribose-phosphate pyrophosphokinase 4JBrowse
13010at6073Complete125.2186.0HOLI01815.G2694transcription cofactor vestigial-like protein 4JBrowse
13022at6073Complete1112.6640.0HOLI00678.G11837DNA (cytosine-5)-methyltransferase 3AJBrowse
13033at6073Complete1733.6953.0HOLI00518.G1709phospholipid-transporting ATPase IA-likeJBrowse
13037at6073Duplicated530.2307.0HOLI01306.G84464-hydroxy-2-oxoglutarate aldolase, mitochondrial-likeJBrowse
13037at6073Duplicated473.2307.0HOLI01784.G604684-hydroxy-2-oxoglutarate aldolase, mitochondrial-likeJBrowse
13042at6073Complete977.2512.0HOLI02829.G24224E3 ubiquitin-protein ligase arih1-likeJBrowse
13067at6073Complete377.0231.0HOLI00604.G42620thioredoxin-like protein 1JBrowse
13158at6073Fragmented454.0217.0HOLI01568.G59550Meiotic recombination protein dmc1JBrowse
13160at6073Complete1263.2774.0HOLI02486.G28601Tuftelin-interacting 11JBrowse
13196at6073Fragmented266.6168.0HOLI04144.G2439150S ribosomal protein L17JBrowse
13237at6073Complete382.5207.0HOLI02125.G34112pre-mRNA-splicing factor SPF27-likeJBrowse
13296at6073Duplicated507.9300.0HOLI00973.G30575Serine/threonine-protein phosphatase 2A activatorJBrowse
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