BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7622at6073Duplicated1078.0780.0ENSORFP00005010421.1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7659at6073Complete1405.9667.0ENSORFP00005009909.1Crooked neck 1JBrowse
7703at6073Complete577.1299.0ENSORFP00005009519.1solute carrier family 25 member 35JBrowse
7713at6073Fragmented367.4242.0ENSORFP00005043386.1ankyrin repeat and BTB/POZ domain-containing protein 1-likeJBrowse
7734at6073Complete627.7325.0ENSORFP00005009004.12-acylglycerol O-acyltransferase 2-AJBrowse
7757at6073Complete260.5137.0ENSORFP00005015621.1Mediator of RNA polymerase II transcription subunit 10JBrowse
7762at6073Duplicated539.1313.0ENSORFP00005038918.1LRP2-binding proteinJBrowse
7762at6073Duplicated539.1313.0ENSORFP00005043883.1LRP2-binding proteinJBrowse
7777at6073Complete611.6472.0ENSORFP00005027549.1DDB1- and CUL4-associated factor 17JBrowse
7812at6073Complete554.6312.0ENSORFP00005014204.1UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-likeJBrowse
7833at6073Complete620.3417.0ENSORFP00005024211.1RNA-binding protein 41-likeJBrowse
7880at6073Complete427.4213.0ENSORFP00005052506.1vesicle-trafficking protein SEC22bJBrowse
7902at6073Complete756.3411.0ENSORFP00005032646.1Sorting nexin-30JBrowse
7924at6073Complete391.0223.0ENSORFP00005027558.1Nuclear transcription factor Y subunit AJBrowse
7950at6073Complete649.7301.0ENSORFP00005031512.1WD repeat-containing protein 61JBrowse
7981at6073Complete919.8436.0ENSORFP00005036954.1Eukaryotic translation initiation factor 3 subunit EJBrowse
8027at6073Duplicated282.1203.0ENSORFP00005012769.1MKRN2 opposite strand protein-likeJBrowse
8027at6073Duplicated282.1203.0ENSORFP00005035344.1MKRN2 opposite strand protein-likeJBrowse
8063at6073Complete2009.91083.0ENSORFP00005006931.1vigilin-likeJBrowse
8095at6073Duplicated249.6139.0ENSORFP00005029299.1mediator of RNA polymerase II transcription subunit 22JBrowse
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