BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76905at6073Duplicated300.2284.0g1774.t1.1zinc finger protein GLI2-likeJBrowse
76915at6073Duplicated891.4833.0BRAKERHOCP00005014072.1WD repeat-containing protein 47JBrowse
76915at6073Duplicated891.4833.0g19945.t1.1WD repeat-containing protein 47JBrowse
76922at6073Duplicated390.5336.0BRAKERHOCP00005009047.1UBX domain-containing protein 1JBrowse
76922at6073Duplicated390.5336.0g3063.t1.1UBX domain-containing protein 1JBrowse
76925at6073Duplicated1614.91470.0BRAKERHOCP00005009261.1uncharacterized protein LOC116302959JBrowse
76925at6073Duplicated1614.91470.0g2309.t1.1uncharacterized protein LOC116302959JBrowse
76928at6073Duplicated245.9185.0BRAKERHOCP00005002193.1E3 ubiquitin-protein ligase march2JBrowse
76928at6073Duplicated245.9185.0g5205.t1.1E3 ubiquitin-protein ligase march2JBrowse
76929at6073Duplicated182.4164.0BRAKERHOCP00005009318.1non-histone chromosomal protein 6JBrowse
76929at6073Duplicated182.4164.0g2218.t1.1non-histone chromosomal protein 6JBrowse
76930at6073Fragmented454.6573.0BRAKERHOCP00005014566.1DNA replication factor Cdt1JBrowse
76935at6073Duplicated154.3145.0BRAKERHOCP00005000713.1uncharacterized protein LOC110236280 isoform X1JBrowse
76935at6073Duplicated154.3145.0g5316.t1.1uncharacterized protein LOC110236280 isoform X1JBrowse
76938at6073Duplicated440.5443.0BRAKERHOCP00005018103.1ELMO domain-containing protein 3JBrowse
76938at6073Duplicated440.5443.0g1010.t1.1ELMO domain-containing protein 3JBrowse
76943at6073Duplicated191.8158.0BRAKERHOCP00005015840.1Zinc finger MYND domain-containing protein 11JBrowse
76943at6073Duplicated191.8158.0g16177.t1.1Zinc finger MYND domain-containing protein 11JBrowse
76943at6073Duplicated193.5155.03411_t.1Zinc finger MYND domain-containing protein 11JBrowse
76943at6073Duplicated193.5155.0BRAKERHOCP00005015073.1Zinc finger MYND domain-containing protein 11JBrowse
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