BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76966at6073Duplicated219.2255.0BRAKERHOCP00005007798.1E2F-associated phosphoprotein-likeJBrowse
76966at6073Duplicated219.2255.0g3727.t1.1E2F-associated phosphoprotein-likeJBrowse
76990at6073Duplicated624.8584.0BRAKERHOCP00005016249.1U3 small nucleolar RNA-associated protein 14 AJBrowse
76990at6073Duplicated624.8584.0g16564.t1.1U3 small nucleolar RNA-associated protein 14 AJBrowse
76992at6073Duplicated448.4434.0BRAKERHOCP00005009621.1glycerate kinase-likeJBrowse
76992at6073Duplicated448.4434.0g14674.t1.1glycerate kinase-likeJBrowse
77002at6073Duplicated355.6424.0BRAKERHOCP00005003713.1Deformed epidermal autoregulatory factor 1JBrowse
77002at6073Duplicated355.6424.0g13554.t1.1Deformed epidermal autoregulatory factor 1JBrowse
77006at6073Duplicated384.2288.0BRAKERHOCP00005019540.1UbiA prenyltransferase domain-containing protein 1JBrowse
77006at6073Duplicated384.2288.0g9500.t1.1UbiA prenyltransferase domain-containing protein 1JBrowse
77014at6073Duplicated230.5247.0BRAKERHOCP00005002681.1leucine-rich repeat-containing protein 40-likeJBrowse
77014at6073Duplicated230.5247.0g4975.t1.1leucine-rich repeat-containing protein 40-likeJBrowse
77014at6073Duplicated203.4239.0BRAKERHOCP00005000903.1leucine-rich repeat-containing protein 40-likeJBrowse
77014at6073Duplicated203.4239.0g7725.t1.1leucine-rich repeat-containing protein 40-likeJBrowse
77026at6073Duplicated620.5778.0BRAKERHOCP00005016158.1radial spoke head 10 homolog B-likeJBrowse
77026at6073Duplicated620.5778.0g18157.t1.1radial spoke head 10 homolog B-likeJBrowse
77036at6073Duplicated339.9283.0BRAKERHOCP00005020249.1Vacuolar protein sorting-associated protein 72JBrowse
77036at6073Duplicated339.9283.0g8151.t1.1Vacuolar protein sorting-associated protein 72JBrowse
77038at6073Fragmented664.6988.0BRAKERHOCP00005015882.1enhancer of mRNA-decapping protein 4JBrowse
77045at6073Fragmented264.4168.0BRAKERHOCP00005002257.1E3 ubiquitin-protein ligase rnf146JBrowse
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