BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77049at6073Duplicated541.8477.0BRAKERHOCP00005008989.1stromal interaction molecule 1-likeJBrowse
77049at6073Duplicated541.8477.0g2241.t1.1stromal interaction molecule 1-likeJBrowse
77068at6073Fragmented1104.9833.0BRAKERHOCP00005000384.1kinesin-like protein 1 isoform X1JBrowse
77076at6073Duplicated900.6990.0BRAKERHOCP00005016290.1leucine-rich repeat and coiled-coil domain-containing protein 1JBrowse
77076at6073Duplicated900.6990.0g17388.t1.1leucine-rich repeat and coiled-coil domain-containing protein 1JBrowse
77078at6073Duplicated530.8349.0BRAKERHOCP00005011814.1coiled-coil domain-containing protein 96JBrowse
77078at6073Duplicated530.8349.0g15294.t1.1coiled-coil domain-containing protein 96JBrowse
77082at6073Fragmented186.4220.0BRAKERHOCP00005019751.1uncharacterized protein LOC116292340JBrowse
77087at6073Duplicated348.4381.0BRAKERHOCP00005001136.1DNA-directed RNA polymerase III subunit RPC4JBrowse
77087at6073Duplicated348.4381.0g7327.t1.1DNA-directed RNA polymerase III subunit RPC4JBrowse
77088at6073Duplicated675.3786.0BRAKERHOCP00005013780.12 -5 -oligoadenylate synthase 1JBrowse
77088at6073Duplicated675.3786.0g18503.t1.12 -5 -oligoadenylate synthase 1JBrowse
77089at6073Duplicated695.2746.0BRAKERHOCP00005014354.1X-linked retinitis pigmentosa GTPase regulator-likeJBrowse
77089at6073Duplicated695.2746.0g17008.t1.1X-linked retinitis pigmentosa GTPase regulator-likeJBrowse
77092at6073Duplicated359.4386.0BRAKERHOCP00005017624.1nucleotide exchange factor SIL1JBrowse
77092at6073Duplicated359.4386.0g1415.t1.1nucleotide exchange factor SIL1JBrowse
77093at6073Duplicated145.1175.0BRAKERHOCP00005017178.1tetratricopeptide repeat protein 33JBrowse
77093at6073Duplicated145.1175.0g636.t1.1tetratricopeptide repeat protein 33JBrowse
77095at6073Duplicated555.3407.0BRAKERHOCP00005020816.1DNA cross-link repair 1AJBrowse
77095at6073Duplicated555.3407.0g8135.t1.1DNA cross-link repair 1AJBrowse
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