BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77177at6073Duplicated221.6319.0BRAKERHOCP00005015692.1HAUS augmin-like complex subunit 4JBrowse
77177at6073Duplicated221.6319.0g17411.t1.1HAUS augmin-like complex subunit 4JBrowse
77182at6073Duplicated255.9263.0BRAKERHOCP00005000973.1transcription initiation factor IIA subunit 1JBrowse
77182at6073Duplicated255.9263.0g4703.t1.1transcription initiation factor IIA subunit 1JBrowse
77199at6073Duplicated258.2237.0BRAKERHOCP00005006929.1reticulon-1-AJBrowse
77199at6073Duplicated258.2237.0g3947.t1.1reticulon-1-AJBrowse
77200at6073Fragmented206.7278.0BRAKERHOCP00005007548.1scaffold protein salvador-likeJBrowse
77217at6073Duplicated341.0253.0BRAKERHOCP00005009708.1ribosomal L1 domain-containing protein 1JBrowse
77217at6073Duplicated341.0253.0g15742.t1.1ribosomal L1 domain-containing protein 1JBrowse
77220at6073Fragmented174.2188.0BRAKERHOCP00005014294.1uncharacterized protein LOC114517244JBrowse
77225at6073Fragmented1021.1747.0BRAKERHOCP00005012516.1abnormal spindle-like microcephaly-associated proteinJBrowse
77227at6073Fragmented329.7350.0BRAKERHOCP00005009714.1ETS translocation variant 1JBrowse
77228at6073Duplicated284.5302.0BRAKERHOCP00005006056.1transcription factor AP-1-likeJBrowse
77228at6073Duplicated284.5302.0g11503.t1.1transcription factor AP-1-likeJBrowse
77240at6073Duplicated356.5666.0BRAKERHOCP00005004933.1protein PAT1 homolog 1JBrowse
77240at6073Duplicated356.5666.0g13520.t1.1protein PAT1 homolog 1JBrowse
77246at6073Duplicated328.8361.0BRAKERHOCP00005000100.1Stromal membrane-associated protein 1JBrowse
77246at6073Duplicated328.8361.0g5460.t1.1Stromal membrane-associated protein 1JBrowse
77250at6073Fragmented533.3697.0BRAKERHOCP00005013613.1rab GTPase-binding effector protein 1JBrowse
77264at6073Duplicated730.6747.0BRAKERHOCP00005014839.1RNA-binding protein 28JBrowse
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