BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77264at6073Duplicated730.6747.0g17211.t1.1RNA-binding protein 28JBrowse
77285at6073Duplicated90.099.0BRAKERHOCP00005016416.139S ribosomal protein L52, mitochondrial-likeJBrowse
77285at6073Duplicated90.099.0g18044.t1.139S ribosomal protein L52, mitochondrial-likeJBrowse
77287at6073Duplicated138.1147.0BRAKERHOCP00005005615.1uncharacterized protein LOC110238137JBrowse
77287at6073Duplicated138.1147.0g12918.t1.1uncharacterized protein LOC110238137JBrowse
77288at6073Fragmented246.9360.0BRAKERHOCP00005005038.1TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6LJBrowse
77312at6073Duplicated575.2445.0BRAKERHOCP00005018790.1probable ATP-dependent RNA helicase DDX20JBrowse
77312at6073Duplicated575.2445.0g10555.t1.1probable ATP-dependent RNA helicase DDX20JBrowse
77313at6073Duplicated253.6705.0BRAKERHOCP00005010692.1axin-1JBrowse
77313at6073Duplicated253.6705.0g15740.t1.1axin-1JBrowse
77318at6073Duplicated187.4265.0BRAKERHOCP00005011407.1FACT complex subunit SSRP1-likeJBrowse
77318at6073Duplicated187.4265.0g15332.t1.1FACT complex subunit SSRP1-likeJBrowse
77333at6073Fragmented227.3423.0BRAKERHOCP00005013456.1anaphase-promoting complex subunit 5JBrowse
77334at6073Fragmented186.4195.0BRAKERHOCP00005010406.1disks large-associated protein 1-likeJBrowse
77346at6073Fragmented249.0199.0BRAKERHOCP00005014747.1protein phosphatase 1 regulatory subunit 12A-likeJBrowse
77348at6073Duplicated255.0243.0BRAKERHOCP00005020131.1sodium/potassium-transporting ATPase subunit beta-1-likeJBrowse
77348at6073Duplicated255.0243.0g8079.t1.1sodium/potassium-transporting ATPase subunit beta-1-likeJBrowse
77372at6073Duplicated347.9355.0BRAKERHOCP00005009757.1crossover junction endonuclease eme1JBrowse
77372at6073Duplicated347.9355.0g15144.t1.1crossover junction endonuclease eme1JBrowse
77381at6073Duplicated597.4739.0BRAKERHOCP00005017711.1coiled-coil domain-containing protein 186JBrowse
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