BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77381at6073Duplicated597.4739.0g599.t1.1coiled-coil domain-containing protein 186JBrowse
77382at6073Duplicated254.7213.0BRAKERHOCP00005002202.1eukaryotic translation initiation factor 3 subunit JJBrowse
77382at6073Duplicated254.7213.0g5091.t1.1eukaryotic translation initiation factor 3 subunit JJBrowse
77383at6073Duplicated318.2290.0BRAKERHOCP00005005177.1probable rRNA-processing protein EBP2JBrowse
77383at6073Duplicated318.2290.0g11254.t1.1probable rRNA-processing protein EBP2JBrowse
77385at6073Duplicated558.7439.0BRAKERHOCP00005020531.1TBC1 domain family member 15JBrowse
77385at6073Duplicated558.7439.0g8084.t1.1TBC1 domain family member 15JBrowse
77389at6073Fragmented269.6445.0BRAKERHOCP00005017479.1Peroxisome proliferator-activated receptor gamma coactivator-related 1JBrowse
77391at6073Duplicated537.3520.0BRAKERHOCP00005015081.1Cleavage stimulation factor subunit 2JBrowse
77391at6073Duplicated537.3520.0g16322.t1.1Cleavage stimulation factor subunit 2JBrowse
77400at6073Fragmented320.2241.0BRAKERHOCP00005019214.1forkhead box protein P1-likeJBrowse
77414at6073Duplicated443.4403.0BRAKERHOCP00005011803.1Myelin expression factor 2JBrowse
77414at6073Duplicated443.4403.0g15967.t1.1Myelin expression factor 2JBrowse
77415at6073Duplicated183.1246.0BRAKERHOCP00005011210.1ELL-associated factor 1JBrowse
77415at6073Duplicated183.1246.0g13806.t1.1ELL-associated factor 1JBrowse
77417at6073Duplicated263.6452.0BRAKERHOCP00005013211.1BICD family-like cargo adapter 1JBrowse
77417at6073Duplicated263.6452.0g18820.t1.1BICD family-like cargo adapter 1JBrowse
77426at6073Duplicated732.6654.0BRAKERHOCP00005011469.1enhancer of polycomb homolog 1JBrowse
77426at6073Duplicated732.6654.0g14021.t1.1enhancer of polycomb homolog 1JBrowse
77439at6073Duplicated481.3743.0BRAKERHOCP00005000316.1coiled-coil domain-containing protein 178JBrowse
Go to page: of 262 pages
TOP