BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77439at6073Duplicated481.3743.0g5545.t1.1coiled-coil domain-containing protein 178JBrowse
77470at6073Duplicated361.3383.0BRAKERHOCP00005009663.1cyclic AMP-dependent transcription factor ATF-2JBrowse
77470at6073Duplicated361.3383.0g15084.t1.1cyclic AMP-dependent transcription factor ATF-2JBrowse
77476at6073Duplicated258.2569.0BRAKERHOCP00005010917.1uncharacterized protein LOC116293469JBrowse
77476at6073Duplicated258.2569.0g14127.t1.1uncharacterized protein LOC116293469JBrowse
77495at6073Duplicated615.8502.0BRAKERHOCP00005000558.1cilia- and flagella-associated protein 53JBrowse
77495at6073Duplicated615.8502.0g5337.t1.1cilia- and flagella-associated protein 53JBrowse
77496at6073Duplicated686.8716.0BRAKERHOCP00005010035.1caskin-2JBrowse
77496at6073Duplicated686.8716.0g15667.t1.1caskin-2JBrowse
77499at6073Duplicated506.5486.0BRAKERHOCP00005005419.1AN1-type zinc finger protein 4JBrowse
77499at6073Duplicated506.5486.0g13451.t1.1AN1-type zinc finger protein 4JBrowse
77505at6073Duplicated348.6614.0BRAKERHOCP00005020036.1HAUS augmin-like complex subunit 5JBrowse
77505at6073Duplicated348.6614.0g8254.t1.1HAUS augmin-like complex subunit 5JBrowse
77510at6073Duplicated575.5561.0BRAKERHOCP00005002264.1trichohyalinJBrowse
77510at6073Duplicated575.5561.0g5626.t1.1trichohyalinJBrowse
77513at6073Duplicated319.6288.0BRAKERHOCP00005007688.1replication stress response regulator SDE2JBrowse
77513at6073Duplicated319.6288.0g3173.t1.1replication stress response regulator SDE2JBrowse
77521at6073Duplicated300.4408.0BRAKERHOCP00005006974.1uncharacterized protein LOC114524962JBrowse
77521at6073Duplicated300.4408.0g1874.t1.1uncharacterized protein LOC114524962JBrowse
77523at6073Duplicated242.7290.0BRAKERHOCP00005013469.1RILP-like protein 1JBrowse
Go to page: of 262 pages
TOP