BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
11582at6073Complete314.4172.0agem_s0013.g124.t1ER membrane protein complex subunit 4JBrowse
11624at6073Complete291.7166.0agem_s0001.g413.t1uncharacterized protein LOC116303231JBrowse
11629at6073Complete409.3208.0agem_s0024.g164.t140S ribosomal proteinJBrowse
11698at6073Complete583.7317.0agem_s0173.g17.t1WD repeat-containing protein 55JBrowse
11744at6073Complete304.0172.0agem_s0078.g27.t1protein ATP6V1FNB-likeJBrowse
11765at6073Duplicated384.8256.0agem_s0079.g10.t1ubiquitin-conjugating enzyme E2 Z-likeJBrowse
11765at6073Duplicated384.9254.0agem_s0079.g10.t2ubiquitin-conjugating enzyme E2 Z-likeJBrowse
11802at6073Complete970.4523.0agem_s0014.g73.t1mitochondrial-processing peptidase subunit alphaJBrowse
11858at6073Complete822.3373.0agem_s0113.g8.t1Casein kinase II subunit alphaJBrowse
11940at6073Complete513.6269.0agem_s0122.g14.t1solute carrier family 35 member E3-likeJBrowse
11943at6073Complete905.6545.0agem_s0042.g118.t1TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5LJBrowse
12015at6073Complete768.4463.0agem_s0134.g36.t1DNA-(apurinic or apyrimidinic site) endonuclease 2JBrowse
12093at6073Fragmented676.2353.0agem_s0065.g34.t1tyrosine-protein kinase HTK16JBrowse
12106at6073Complete966.9492.0agem_s0036.g43.t2GATA-binding factor 2-likeJBrowse
12121at6073Complete501.2371.0agem_s0165.g33.t1Ectonucleoside triphosphate diphosphohydrolase 5JBrowse
12142at6073Complete578.9281.0agem_s0144.g23.t1Golgi phosphoprotein 3-likeJBrowse
12150at6073Complete854.5506.0agem_s0120.g20.t1protein smoothened-likeJBrowse
12151at6073Complete1571.1958.0agem_s0070.g34.t1F-box/WD repeat-containing protein 10JBrowse
12222at6073Complete529.8374.0agem_s0118.g52.t1MORN repeat-containing protein 1JBrowse
12286at6073Duplicated651.61004.0agem_s0027.g156.t1integrinJBrowse
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