BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
12353at6073Complete1280.5737.0aint_s0338.g11.t1probable E3 ubiquitin-protein ligase HECTD2JBrowse
12355at6073Complete575.4345.0aint_s0475.g3.t1uncharacterized protein LOC131786110 isoform X1JBrowse
12360at6073Complete1059.7532.0aint_s0143.g27.t1Phosphoglucomutase-2JBrowse
12410at6073Duplicated898.5505.0aint_s0430.g5.t1N6-adenosine-methyltransferase catalytic subunit-likeJBrowse
12410at6073Duplicated895.4505.0aint_s0430.g5.t2N6-adenosine-methyltransferase catalytic subunit-likeJBrowse
12477at6073Complete577.8344.0aint_s0366.g22.t1adenosine deaminase-like protein isoform X1JBrowse
12498at6073Complete837.1412.0aint_s0693.g4.t1Zinc finger, RING-typeJBrowse
12527at6073Fragmented1135.3528.0aint_s0003.g68.t1acetyl-coenzyme A synthetase 2-like, mitochondrialJBrowse
12540at6073Complete1215.6659.0aint_s0037.g59.t1endothelin-converting enzyme 1JBrowse
12544at6073Duplicated488.0264.0aint_s0164.g13.t1Putative deoxyribonuclease tatdn3JBrowse
12544at6073Duplicated474.0264.0aint_s0164.g13.t2Putative deoxyribonuclease tatdn3JBrowse
12573at6073Complete180.098.0aint_s0106.g30.t1signal peptidase complex subunit 1JBrowse
12596at6073Complete855.9409.0aint_s0135.g2.t1elongation factor TuJBrowse
12608at6073Complete407.5249.0aint_s0087.g36.t1homeoboxJBrowse
12680at6073Complete842.5396.0aint_s0077.g44.t1ATP-dependent RNA helicase eIF4AJBrowse
12784at6073Complete513.1345.0aint_s0051.g22.t1T-complex protein 11JBrowse
12788at6073Complete373.4187.0aint_s0001.g167.t1RNA polymerase II subunit A C-terminal domain phosphataseJBrowse
12802at6073Complete662.5412.0aint_s0301.g15.t1uncharacterized protein LOC116306887JBrowse
12845at6073Complete574.1307.0aint_s0162.g11.t1protein YIPF1-likeJBrowse
12900at6073Duplicated489.1371.0aint_s0417.g17.t2uncharacterized protein LOC122946992JBrowse
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