BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7622at6073Duplicated1229.1788.0XP_074610906.1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7622at6073Duplicated1229.1788.0XP_074610907.1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7622at6073Duplicated1229.1788.0XP_074610909.1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7622at6073Duplicated1223.4788.0XP_074610912.1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7622at6073Duplicated1074.1651.0XP_074610913.1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7622at6073Duplicated1074.1651.0XP_074610914.1Inactive tyrosine-protein kinase transmembrane receptor ror1JBrowse
7659at6073Complete1428.7668.0XP_074627812.1Crooked neck 1JBrowse
7703at6073Complete582.5302.0XP_074626785.1solute carrier family 25 member 35JBrowse
7713at6073Complete798.9473.0XP_074609944.1ankyrin repeat and BTB/POZ domain-containing protein 1-likeJBrowse
7734at6073Complete650.1326.0XP_074633629.12-acylglycerol O-acyltransferase 2-AJBrowse
7757at6073Complete263.7137.0XP_074618493.1Mediator of RNA polymerase II transcription subunit 10JBrowse
7762at6073Complete562.2319.0XP_074611378.1LRP2-binding proteinJBrowse
7777at6073Complete698.5474.0XP_074613176.1DDB1- and CUL4-associated factor 17JBrowse
7812at6073Complete576.7312.0XP_074612582.1UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-likeJBrowse
7833at6073Duplicated671.7420.0XP_074621574.1RNA-binding protein 41-likeJBrowse
7833at6073Duplicated671.7420.0XP_074621575.1RNA-binding protein 41-likeJBrowse
7833at6073Duplicated671.7420.0XP_074621576.1RNA-binding protein 41-likeJBrowse
7841at6073Duplicated1523.8856.0XP_074614627.1heat shock 70 kDa protein 12A-likeJBrowse
7841at6073Duplicated1523.8856.0XP_074614628.1heat shock 70 kDa protein 12A-likeJBrowse
7841at6073Duplicated1523.8856.0XP_074614629.1heat shock 70 kDa protein 12A-likeJBrowse
Go to page: of 238 pages
TOP