BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13160at6073Complete1381.0774.0pspe_0.1.m1.66257.m1Tuftelin-interacting 11JBrowse
13196at6073Complete376.8225.0pspe_0.1.m1.32062.m150S ribosomal protein L17JBrowse
13237at6073Complete311.3177.0pspe_0.1.m1.9825.m1pre-mRNA-splicing factor SPF27-likeJBrowse
13295at6073Complete475.1275.0pspe_0.1.m1.43596.m1zinc finger protein 367JBrowse
13314at6073Complete410.5234.0pspe_0.1.m1.31427.m1elongation of very long chain fatty acids protein 4-likeJBrowse
13403at6073Complete583.5654.0pspe_0.1.m1.31317.m1disintegrin and metalloproteinase domain-containing protein 10JBrowse
13406at6073Complete224.3121.0pspe_0.1.m1.54322.m1Zinc finger, RING-typeJBrowse
13408at6073Complete773.8457.0pspe_0.1.m1.51978.m1synaptic functional regulator FMR1-likeJBrowse
13432at6073Complete527.6270.0pspe_0.1.m1.19481.m1uncharacterized protein F13E9.13, mitochondrial-likeJBrowse
13439at6073Complete755.6430.0pspe_0.1.m1.60413.m1U3 small nucleolar RNA-interacting protein 2JBrowse
13441at6073Complete554.7399.0pspe_0.1.m1.23182.m1synaptotagmin-4-like isoform X1JBrowse
13458at6073Complete864.4387.0pspe_0.1.m1.42851.m1COP9 signalosome complex subunit 2JBrowse
13459at6073Duplicated320.1308.0pspe_0.1.m1.35508.m1uncharacterized protein LOC110049868JBrowse
13459at6073Duplicated318.8307.0pspe_0.1.m1.67173.m1uncharacterized protein LOC110049868JBrowse
13510at6073Complete1522.1756.0pspe_0.1.m1.26175.m1vacuolar protein sorting-associated protein 51 homologJBrowse
13519at6073Complete372.0198.0pspe_0.1.m1.37910.m1COMM domain-containing protein 4JBrowse
13534at6073Complete515.4248.0pspe_0.1.m1.49917.m1CTD nuclear envelope phosphatase 1A-likeJBrowse
13602at6073Complete690.6427.0pspe_0.1.m1.17548.m1proline dehydrogenase 1, mitochondrial-likeJBrowse
13604at6073Complete413.8247.0pspe_0.1.m1.15114.m1interleukin-1 receptor-associated kinase 1-binding protein 1JBrowse
13605at6073Duplicated416.7226.0pspe_0.1.m1.68639.m1Juxtaposed with another zinc finger protein 1JBrowse
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