BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
11147at6073Complete291.9207.0CAB3991666.1ADP-ribosylation factor-like protein 15JBrowse
11149at6073Duplicated237.0145.0CAB4035718.1Ubiquitin-conjugating enzyme E2 CJBrowse
11149at6073Duplicated223.4136.0CAB4035719.1Ubiquitin-conjugating enzyme E2 CJBrowse
11157at6073Fragmented257.7269.0CAB4014557.1V-type proton ATPase subunit S1JBrowse
11171at6073Fragmented575.6333.0CAB4040535.1probable ATP-dependent RNA helicase DDX52JBrowse
11194at6073Fragmented177.1131.0CAB4012967.1THUMP domain-containing protein 1JBrowse
11215at6073Duplicated1330.9729.0CAB3990250.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1330.8729.0CAB3990249.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11215at6073Duplicated1282.1673.0CAB3990251.1delta-1-pyrroline-5-carboxylate synthase-likeJBrowse
11255at6073Fragmented309.0197.0CAB4024571.1histone-lysine N-methyltransferase SETMARJBrowse
11315at6073Complete172.776.0CAB3992793.1small nuclear ribonucleoprotein GJBrowse
11491at6073Complete233.1120.0CAB3999316.1microtubule-associated proteins 1A/1B light chain 3A-likeJBrowse
11560at6073Duplicated1349.4819.0CAB3979102.1serine/threonine-protein phosphatase 4 regulatory subunit 1JBrowse
11560at6073Duplicated1349.0819.0CAB3979101.1serine/threonine-protein phosphatase 4 regulatory subunit 1JBrowse
11581at6073Complete238.3141.0CAB4001836.1ribonuclease P/MRP protein subunit POP5JBrowse
11582at6073Complete296.8172.0CAB4031718.1ER membrane protein complex subunit 4JBrowse
11624at6073Complete239.4165.0CAB3976562.1uncharacterized protein LOC116303231JBrowse
11629at6073Duplicated421.1208.0CAB4006906.140S ribosomal proteinJBrowse
11629at6073Duplicated419.6208.0CAB4006907.140S ribosomal proteinJBrowse
11698at6073Complete578.4319.0CAB4002404.1WD repeat-containing protein 55JBrowse
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