BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8095at6073Duplicated249.6139.0ENSORFP00005044503.1mediator of RNA polymerase II transcription subunit 22JBrowse
8171at6073Duplicated217.9117.0ENSORFP00005017034.1mitochondrial pyruvate carrier 2JBrowse
8171at6073Duplicated224.8116.0ENSORFP00005017038.1mitochondrial pyruvate carrier 2JBrowse
8257at6073Complete1582.0736.0ENSORFP00005028391.1Cullin-3JBrowse
8280at6073Complete308.2207.0ENSORFP00005015692.1uncharacterized protein LOC122947107JBrowse
8347at6073Duplicated1400.3836.0ENSORFP00005041913.1inositol polyphosphate 5-phosphatase OCRLJBrowse
8347at6073Duplicated1451.6811.0ENSORFP00005041925.1inositol polyphosphate 5-phosphatase OCRLJBrowse
8347at6073Duplicated1412.2811.0ENSORFP00005041935.1inositol polyphosphate 5-phosphatase OCRLJBrowse
8347at6073Duplicated1368.3738.0ENSORFP00005041950.1inositol polyphosphate 5-phosphatase OCRLJBrowse
8368at6073Fragmented951.5524.0ENSORFP00005036639.1FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8406at6073Complete598.5320.0ENSORFP00005013855.1palmitoyltransferase ZDHHC15B-likeJBrowse
8407at6073Complete762.7347.0ENSORFP00005027187.1Mitogen-activated kinase 1JBrowse
8465at6073Duplicated697.9346.0ENSORFP00005003806.1hepatocyte nuclear factor 4-gammaJBrowse
8465at6073Duplicated696.8344.0ENSORFP00005003810.1hepatocyte nuclear factor 4-gammaJBrowse
8477at6073Complete136.0117.0ENSORFP00005012048.1uncharacterized protein LOC116295621JBrowse
8488at6073Complete536.4343.0ENSORFP00005002747.1spermatogenesis-associated protein 17JBrowse
8515at6073Complete439.6247.0ENSORFP00005013210.1ras-related protein Rab-36JBrowse
8529at6073Complete718.8437.0ENSORFP00005001299.1ras association domain-containing protein 1JBrowse
8596at6073Complete199.6123.0ENSORFP00005025431.1eukaryotic translation initiation factor 4E-binding protein 1JBrowse
8599at6073Duplicated544.4268.0ENSORFP00005008949.1Cytosolic Fe-S cluster assembly factor NUBP2JBrowse
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