BUSCO Gene Details in Acropora spathulata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora spathulataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 96.9% [S: 46.6%, D: 50.4%] F: 1.7%, M: 1.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,105 (96.9%)1,492 (46.6%)1,613 (50.4%)55 (1.7%)43 (1.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora spathulata: 5,412 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77192at6073Duplicated406.8268.0ENSEWQP00005018406.1HAUS augmin-like complex subunit 1JBrowse
77192at6073Duplicated377.8249.0ENSEWQP00005018400.1HAUS augmin-like complex subunit 1JBrowse
77195at6073Complete330.3280.0ENSEWQP00005007519.1WD40/YVTN repeat-like-containing domain superfamilyJBrowse
77199at6073Duplicated394.4235.0ENSEWQP00005036289.1reticulon-1-AJBrowse
77199at6073Duplicated351.4203.0ENSEWQP00005036301.1reticulon-1-AJBrowse
77200at6073Duplicated656.0515.0ENSEWQP00005004114.1scaffold protein salvador-likeJBrowse
77200at6073Duplicated655.8515.0ENSEWQP00005004105.1scaffold protein salvador-likeJBrowse
77208at6073Complete705.9450.0ENSEWQP00005001477.1ribonuclease IIIJBrowse
77217at6073Duplicated372.8252.0ENSEWQP00005046076.1ribosomal L1 domain-containing protein 1JBrowse
77217at6073Duplicated343.0250.0ENSEWQP00005046062.1ribosomal L1 domain-containing protein 1JBrowse
77217at6073Duplicated364.5243.0ENSEWQP00005046073.1ribosomal L1 domain-containing protein 1JBrowse
77220at6073Complete401.4271.0ENSEWQP00005042243.1uncharacterized protein LOC114517244JBrowse
77225at6073Complete2721.61926.0ENSEWQP00005009125.1abnormal spindle-like microcephaly-associated proteinJBrowse
77227at6073Duplicated758.1443.0ENSEWQP00005040054.1ETS translocation variant 1JBrowse
77227at6073Duplicated675.8388.0ENSEWQP00005040063.1ETS translocation variant 1JBrowse
77228at6073Complete440.1305.0ENSEWQP00005008967.1transcription factor AP-1-likeJBrowse
77240at6073Duplicated1074.3777.0ENSEWQP00005010460.1protein PAT1 homolog 1JBrowse
77240at6073Duplicated1074.3777.0ENSEWQP00005010461.1protein PAT1 homolog 1JBrowse
77240at6073Duplicated1072.2775.0ENSEWQP00005010453.1protein PAT1 homolog 1JBrowse
77246at6073Duplicated466.0361.0ENSEWQP00005003431.1Stromal membrane-associated protein 1JBrowse
Go to page: of 271 pages
TOP