BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
12286at6073Duplicated652.8995.0agem_s0027.g156.t2integrinJBrowse
12353at6073Complete1280.6737.0agem_s0273.g12.t1probable E3 ubiquitin-protein ligase HECTD2JBrowse
12355at6073Complete572.8345.0agem_s0012.g130.t1uncharacterized protein LOC131786110 isoform X1JBrowse
12360at6073Fragmented504.0262.0agem_s0066.g76.t1Phosphoglucomutase-2JBrowse
12410at6073Duplicated932.1505.0agem_s0073.g29.t1N6-adenosine-methyltransferase catalytic subunit-likeJBrowse
12410at6073Duplicated929.5505.0agem_s0073.g29.t2N6-adenosine-methyltransferase catalytic subunit-likeJBrowse
12477at6073Complete578.8344.0agem_s0005.g66.t1adenosine deaminase-like protein isoform X1JBrowse
12498at6073Complete834.4412.0agem_s0026.g113.t1Zinc finger, RING-typeJBrowse
12527at6073Fragmented1137.0528.0agem_s0047.g106.t1acetyl-coenzyme A synthetase 2-like, mitochondrialJBrowse
12544at6073Complete513.3219.0agem_s0088.g39.t2Putative deoxyribonuclease tatdn3JBrowse
12573at6073Complete182.698.0agem_s0140.g43.t1signal peptidase complex subunit 1JBrowse
12596at6073Complete857.6409.0agem_s0002.g220.t1elongation factor TuJBrowse
12608at6073Complete405.9249.0agem_s0032.g155.t1homeoboxJBrowse
12680at6073Complete842.5396.0agem_s0005.g52.t1ATP-dependent RNA helicase eIF4AJBrowse
12684at6073Complete621.5337.0agem_s0073.g17.t1cysteine and histidine-rich protein 1-AJBrowse
12784at6073Complete513.2345.0agem_s0033.g48.t1T-complex protein 11JBrowse
12788at6073Complete374.6187.0agem_s0107.g26.t1RNA polymerase II subunit A C-terminal domain phosphataseJBrowse
12802at6073Complete665.2412.0agem_s0259.g9.t1uncharacterized protein LOC116306887JBrowse
12819at6073Complete297.7192.0agem_s0027.g44.t1homeobox protein Hox-B5-likeJBrowse
12845at6073Duplicated583.4306.0agem_s0009.g60.t2protein YIPF1-likeJBrowse
Go to page: of 173 pages
TOP