BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
12900at6073Duplicated476.9371.0aint_s0417.g17.t3uncharacterized protein LOC122946992JBrowse
12912at6073Complete2014.9942.0aint_s0051.g17.t1coatomer subunit betaJBrowse
12919at6073Complete457.9274.0aint_s0035.g82.t1protein-S-isoprenylcysteine O-methyltransferase-likeJBrowse
12980at6073Complete1040.9746.0aint_s0033.g74.t1uncharacterized protein LOC114955734 isoform X1JBrowse
12994at6073Complete598.2312.0aint_s0060.g47.t1ribose-phosphate pyrophosphokinase 4JBrowse
13010at6073Complete345.1219.0aint_s0114.g30.t1transcription cofactor vestigial-like protein 4JBrowse
13022at6073Complete1192.2666.0aint_s0092.g8.t1DNA (cytosine-5)-methyltransferase 3AJBrowse
13033at6073Fragmented1797.6846.0aint_s0026.g80.t2phospholipid-transporting ATPase IA-likeJBrowse
13037at6073Complete613.2332.0aint_s0119.g18.t14-hydroxy-2-oxoglutarate aldolase, mitochondrial-likeJBrowse
13042at6073Complete945.5447.0aint_s0015.g46.t1E3 ubiquitin-protein ligase arih1-likeJBrowse
13067at6073Complete454.9242.0aint_s0277.g19.t1thioredoxin-like protein 1JBrowse
13093at6073Complete222.3150.0aint_s0178.g8.t1acyl carrier protein-likeJBrowse
13158at6073Duplicated601.8317.0aint_s0270.g11.t1Meiotic recombination protein dmc1JBrowse
13158at6073Duplicated547.6295.0aint_s0270.g11.t2Meiotic recombination protein dmc1JBrowse
13160at6073Complete1367.0691.0aint_s0096.g37.t1Tuftelin-interacting 11JBrowse
13196at6073Complete368.6207.0aint_s0176.g16.t150S ribosomal protein L17JBrowse
13295at6073Complete505.3304.0aint_s0226.g9.t1zinc finger protein 367JBrowse
13296at6073Complete577.7299.0aint_s0102.g8.t1Serine/threonine-protein phosphatase 2A activatorJBrowse
13314at6073Complete405.7235.0aint_s0395.g10.t1elongation of very long chain fatty acids protein 4-likeJBrowse
13329at6073Complete474.3240.0aint_s0229.g8.t1dihydropteridine reductase-likeJBrowse
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