BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7841at6073Duplicated1523.8856.0XP_074614630.1heat shock 70 kDa protein 12A-likeJBrowse
7871at6073Duplicated300.6181.0XP_074632315.1ATP synthase subunit s, mitochondrial-likeJBrowse
7871at6073Duplicated300.5181.0XP_074632314.1ATP synthase subunit s, mitochondrial-likeJBrowse
7880at6073Duplicated437.6213.0XP_074618371.1vesicle-trafficking protein SEC22bJBrowse
7880at6073Duplicated388.5188.0XP_074618378.1vesicle-trafficking protein SEC22bJBrowse
7902at6073Complete774.8414.0XP_074612180.1Sorting nexin-30JBrowse
7924at6073Duplicated402.0227.0XP_074613181.1Nuclear transcription factor Y subunit AJBrowse
7924at6073Duplicated402.0227.0XP_074613182.1Nuclear transcription factor Y subunit AJBrowse
7950at6073Duplicated650.6301.0XP_074614049.1WD repeat-containing protein 61JBrowse
7950at6073Duplicated590.5274.0XP_074614050.1WD repeat-containing protein 61JBrowse
7950at6073Duplicated585.3263.0XP_074614051.1WD repeat-containing protein 61JBrowse
7981at6073Complete918.0436.0XP_074636983.1Eukaryotic translation initiation factor 3 subunit EJBrowse
8010at6073Complete1242.9730.0XP_074621238.13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8027at6073Complete327.4205.0XP_074626279.1MKRN2 opposite strand protein-likeJBrowse
8063at6073Complete2288.21228.0XP_074626692.1vigilin-likeJBrowse
8095at6073Duplicated260.5139.0XP_074639802.1mediator of RNA polymerase II transcription subunit 22JBrowse
8095at6073Duplicated260.2139.0XP_074639796.1mediator of RNA polymerase II transcription subunit 22JBrowse
8171at6073Complete229.2119.0XP_074626165.1mitochondrial pyruvate carrier 2JBrowse
8257at6073Complete1597.2740.0XP_074634638.1Cullin-3JBrowse
8280at6073Duplicated328.7217.0XP_074623757.1uncharacterized protein LOC122947107JBrowse
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