BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
12912at6073Complete2014.9942.0FUN_001184-T1coatomer subunit betaJBrowse
12919at6073Complete458.2273.0FUN_013642-T1protein-S-isoprenylcysteine O-methyltransferase-likeJBrowse
12980at6073Complete1041.1746.0FUN_023120-T1uncharacterized protein LOC114955734 isoform X1JBrowse
12994at6073Complete597.1312.0FUN_032972-T1ribose-phosphate pyrophosphokinase 4JBrowse
13010at6073Complete346.0219.0FUN_025140-T1transcription cofactor vestigial-like protein 4JBrowse
13022at6073Complete1199.6666.0FUN_021938-T1DNA (cytosine-5)-methyltransferase 3AJBrowse
13033at6073Duplicated2341.91118.0FUN_023946-T2phospholipid-transporting ATPase IA-likeJBrowse
13033at6073Duplicated2341.81117.0FUN_023946-T1phospholipid-transporting ATPase IA-likeJBrowse
13037at6073Complete606.1330.0FUN_022936-T14-hydroxy-2-oxoglutarate aldolase, mitochondrial-likeJBrowse
13042at6073Complete1094.6513.0FUN_004574-T1E3 ubiquitin-protein ligase arih1-likeJBrowse
13067at6073Fragmented403.0216.0FUN_000319-T1thioredoxin-like protein 1JBrowse
13093at6073Complete218.2150.0FUN_033673-T1acyl carrier protein-likeJBrowse
13196at6073Complete374.8224.0FUN_027975-T150S ribosomal protein L17JBrowse
13237at6073Complete419.7207.0FUN_025350-T1pre-mRNA-splicing factor SPF27-likeJBrowse
13295at6073Complete508.0304.0FUN_029753-T1zinc finger protein 367JBrowse
13296at6073Complete577.7299.0FUN_039924-T1Serine/threonine-protein phosphatase 2A activatorJBrowse
13314at6073Complete414.2235.0FUN_009269-T1elongation of very long chain fatty acids protein 4-likeJBrowse
13329at6073Complete475.5240.0FUN_023758-T1dihydropteridine reductase-likeJBrowse
13403at6073Complete1031.5657.0FUN_043116-T1disintegrin and metalloproteinase domain-containing protein 10JBrowse
13406at6073Complete199.8112.0FUN_037084-T1Zinc finger, RING-typeJBrowse
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