BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
7542at6073Duplicated862.6520.0g15300.t1.1Nuclear protein localization protein 4JBrowse
7565at6073Duplicated592.7308.0BRAKERHOCP00005005814.1deoxyribose-phosphate aldolaseJBrowse
7565at6073Duplicated592.7308.0g13667.t1.1deoxyribose-phosphate aldolaseJBrowse
7589at6073Duplicated324.7188.0BRAKERHOCP00005008296.160S ribosomal protein L9-likeJBrowse
7589at6073Duplicated324.7188.0g2890.t1.160S ribosomal protein L9-likeJBrowse
7596at6073Duplicated3329.62131.0BRAKERHOCP00005015485.1activating signal cointegrator 1 complex subunitJBrowse
7596at6073Duplicated3329.62131.0g16809.t1.1activating signal cointegrator 1 complex subunitJBrowse
7659at6073Duplicated1273.3664.0BRAKERHOCP00005002934.1Crooked neck 1JBrowse
7659at6073Duplicated1273.3664.0g6438.t1.1Crooked neck 1JBrowse
7703at6073Duplicated502.6301.0BRAKERHOCP00005018600.1solute carrier family 25 member 35JBrowse
7703at6073Duplicated502.6301.0g9728.t1.1solute carrier family 25 member 35JBrowse
7734at6073Duplicated569.7325.0BRAKERHOCP00005020085.12-acylglycerol O-acyltransferase 2-AJBrowse
7734at6073Duplicated569.7325.0g7814.t1.12-acylglycerol O-acyltransferase 2-AJBrowse
7734at6073Duplicated518.7278.011487_t.12-acylglycerol O-acyltransferase 2-AJBrowse
7734at6073Duplicated518.7278.0BRAKERHOCP00005020072.12-acylglycerol O-acyltransferase 2-AJBrowse
7757at6073Duplicated207.3133.0BRAKERHOCP00005015859.1Mediator of RNA polymerase II transcription subunit 10JBrowse
7757at6073Duplicated207.3133.0g17930.t1.1Mediator of RNA polymerase II transcription subunit 10JBrowse
7762at6073Duplicated378.7286.0BRAKERHOCP00005017947.1LRP2-binding proteinJBrowse
7762at6073Duplicated378.7286.0g1542.t1.1LRP2-binding proteinJBrowse
7812at6073Duplicated505.9309.0BRAKERHOCP00005004602.1UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-likeJBrowse
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