BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13938at6073Complete1037.9578.0HOLI00358.G38656Very long-chain specific acyl-CoA dehydrogenase, mitochondrialJBrowse
13982at6073Complete490.4272.0HOLI01650.G54634autophagy protein 5-likeJBrowse
14064at6073Duplicated264.8344.0HOLI00001.G51471prostaglandin reductase 2JBrowse
14064at6073Duplicated246.2343.0HOLI01031.G12954prostaglandin reductase 2JBrowse
14064at6073Duplicated250.8329.0HOLI00722.G39466prostaglandin reductase 2JBrowse
14064at6073Duplicated240.0329.0HOLI00722.G39468prostaglandin reductase 2JBrowse
14064at6073Duplicated228.0329.0HOLI00722.G39467prostaglandin reductase 2JBrowse
14069at6073Complete766.8684.0HOLI00161.G4970Integrator complex subunit 10JBrowse
14083at6073Complete410.0287.0HOLI00974.G33062ELMO domain-containing protein 2JBrowse
14136at6073Complete401.6360.0HOLI00735.G39788golgin-45-likeJBrowse
14176at6073Complete346.1239.0HOLI00087.G59718Replication protein A 32 kDa subunitJBrowse
14205at6073Complete244.0183.0HOLI00696.G1387639S ribosomal protein L22, mitochondrial-likeJBrowse
14214at6073Complete667.8434.0HOLI00156.G47443SynaptotagminJBrowse
14256at6073Duplicated429.8307.0HOLI00039.G13741TAR DNA-binding protein 43JBrowse
14256at6073Duplicated440.4303.0HOLI00039.G13740TAR DNA-binding protein 43JBrowse
14280at6073Complete312.2179.0HOLI00573.G11320malignant T-cell-amplified sequence 1JBrowse
14288at6073Complete589.0486.0HOLI00575.G45131nucleolar complex protein 4 homologJBrowse
14388at6073Fragmented245.6266.0HOLI01774.G34071protein zwilch homologJBrowse
14433at6073Complete621.9421.0HOLI01943.G44850vacuolar protein sorting-associated protein 4B-likeJBrowse
14442at6073Fragmented325.3291.0HOLI05701.G32897evolutionarily conserved signaling intermediate in Toll pathway, mitochondrialJBrowse
Go to page: of 152 pages
TOP