BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13605at6073Duplicated416.7226.0pspe_0.1.m1.70309.m1Juxtaposed with another zinc finger protein 1JBrowse
13611at6073Complete498.0277.0pspe_0.1.m1.49342.m1lipoma-preferred partner homologJBrowse
13615at6073Complete2978.61474.0pspe_0.1.m1.52169.m1disco-interacting protein 2-likeJBrowse
13641at6073Complete509.0275.0pspe_0.1.m1.28390.m13-oxo-5-alpha-steroid 4-dehydrogenaseJBrowse
13665at6073Complete676.2422.0pspe_0.1.m1.42457.m1glucose-6-phosphate exchanger SLC37A4JBrowse
13712at6073Fragmented260.3132.0pspe_0.1.m1.29274.m15-demethoxyubiquinone hydroxylase, mitochondrial-likeJBrowse
13757at6073Complete279.2193.0pspe_0.1.m1.50431.m1zinc finger FYVE domain-containing protein 21JBrowse
13842at6073Complete530.5351.0pspe_0.1.m1.19067.m1doublesex- and mab-3-related transcription factor A2JBrowse
13912at6073Complete365.2268.0pspe_0.1.m1.6802.m1RWD domain-containing protein 3JBrowse
13938at6073Complete1168.6579.0pspe_0.1.m1.20098.m1Very long-chain specific acyl-CoA dehydrogenase, mitochondrialJBrowse
13980at6073Complete440.0339.0pspe_0.1.m1.27945.m1lysine-specific demethylase 8-likeJBrowse
13982at6073Complete466.8248.0pspe_0.1.m1.37188.m1autophagy protein 5-likeJBrowse
14048at6073Complete976.5666.0pspe_0.1.m1.57105.m1tyrosine-protein kinase RYK-likeJBrowse
14064at6073Complete503.6286.0pspe_0.1.m1.52542.m1prostaglandin reductase 2JBrowse
14069at6073Fragmented672.4423.0pspe_0.1.m1.40845.m1Integrator complex subunit 10JBrowse
14083at6073Complete370.2286.0pspe_0.1.m1.20438.m1ELMO domain-containing protein 2JBrowse
14136at6073Complete619.5449.0pspe_0.1.m1.5888.m1golgin-45-likeJBrowse
14176at6073Fragmented291.8192.0pspe_0.1.m1.56680.m1Replication protein A 32 kDa subunitJBrowse
14194at6073Fragmented248.4308.0pspe_0.1.m1.39054.m1uncharacterized protein LOC116294854JBrowse
14205at6073Complete332.9186.0pspe_0.1.m1.26643.m139S ribosomal protein L22, mitochondrial-likeJBrowse
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