BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8599at6073Duplicated543.6266.0ENSORFP00005008941.1Cytosolic Fe-S cluster assembly factor NUBP2JBrowse
8605at6073Complete1433.4848.0ENSORFP00005002717.1Thioredoxin domain-containing 12JBrowse
8658at6073Duplicated725.8450.0ENSORFP00005041069.1F-box only protein 47JBrowse
8658at6073Duplicated704.3450.0ENSORFP00005041052.1F-box only protein 47JBrowse
8674at6073Complete498.9280.0ENSORFP00005007718.1Solute carrier family 25 member 51JBrowse
8715at6073Complete263.0140.0ENSORFP00005013899.1AP-4 complex subunit sigma-1JBrowse
8718at6073Fragmented1277.0653.0ENSORFP00005023340.1Ubiquitin conjugation factor E4 BJBrowse
8749at6073Complete992.6739.0ENSORFP00005012573.1epithelial discoidin domain-containing receptor 1JBrowse
8765at6073Duplicated638.7319.0ENSORFP00005023479.1transaldolaseJBrowse
8765at6073Duplicated638.7319.0ENSORFP00005046901.1transaldolaseJBrowse
8767at6073Fragmented1112.3572.0ENSORFP00005034849.1importin-5JBrowse
8845at6073Complete846.9536.0ENSORFP00005022646.1early growth response protein 1JBrowse
8864at6073Complete396.0261.0ENSORFP00005001377.1Cyclin-dependent kinase 5 activator 1JBrowse
8869at6073Complete464.0253.0ENSORFP00005031745.1Haloacid dehalogenase-like hydrolase domain-containing protein 2JBrowse
8874at6073Complete552.2303.0ENSORFP00005002183.1regulation of nuclear pre-mRNA domain-containing protein 1BJBrowse
8899at6073Duplicated748.6398.0ENSORFP00005011116.1transcriptional enhancer factor TEF-1-likeJBrowse
8899at6073Duplicated747.6398.0ENSORFP00005011106.1transcriptional enhancer factor TEF-1-likeJBrowse
8899at6073Duplicated714.9398.0ENSORFP00005011092.1transcriptional enhancer factor TEF-1-likeJBrowse
8905at6073Duplicated500.0419.0ENSORFP00005017261.1protein naked cuticle homolog 2-likeJBrowse
8905at6073Duplicated492.1415.0ENSORFP00005017267.1protein naked cuticle homolog 2-likeJBrowse
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