BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14446at6073Complete299.2166BRAKERIOWP00000014796.1sorcinJBrowse
14459at6073Complete386.4267BRAKERIOWP00000009437.1exosome complex component RRP43JBrowse
14502at6073Complete381.8372BRAKERIOWP00000002519.1growth/differentiation factor 6-A-likeJBrowse
14507at6073Complete395.3293BRAKERIOWP00000007445.1SynaptotagminJBrowse
14509at6073Fragmented998.8828BRAKERIOWP00000008800.1Fanconi anemia group JJBrowse
14517at6073Complete218.7110BRAKERIOWP00000002902.1N-alpha-acetyltransferase 20JBrowse
14525at6073Complete1029.0517BRAKERIOWP00000013930.1Aspartate--tRNA ligase, cytoplasmicJBrowse
14562at6073Complete352.4204BRAKERIOWP00000009310.1ubiquitin-conjugating enzyme E2 SJBrowse
14574at6073Complete586.2396BRAKERIOWP00000015973.1glucose-fructose oxidoreductase domain-containing protein 1JBrowse
14606at6073Complete850.7450BRAKERIOWP00000011928.1uncharacterized protein LOC116289408JBrowse
14608at6073Complete607.1293BRAKERIOWP00000011606.1ras-related GTP-binding protein AJBrowse
14620at6073Complete567.8353BRAKERIOWP00000009500.1Terminal nucleotidyltransferase 5CJBrowse
14673at6073Complete944.91010BRAKERIOWP00000003973.1nuclear pore complex protein Nup133-likeJBrowse
14741at6073Complete389.6233BRAKERIOWP00000015270.1Eukaryotic translation initiation factor 4E type 2JBrowse
14751at6073Complete867.2454BRAKERIOWP00000011181.1Golgi pH regulator AJBrowse
14768at6073Complete535.7509BRAKERIOWP00000006032.1protein FAM214A-likeJBrowse
14781at6073Complete1013.4571BRAKERIOWP00000016010.160 kDa heat shock protein, mitochondrialJBrowse
14810at6073Fragmented154.389BRAKERIOWP00000007904.160S ribosomal protein L34JBrowse
14845at6073Complete313.9257BRAKERIOWP00000006064.1Ribosomal RNA-processing protein 7 AJBrowse
14848at6073Complete1224.0833BRAKERIOWP00000006733.1WD repeat-containing protein 64-likeJBrowse
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