BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13403at6073Complete624.3653.0aint_s0107.g14.t1disintegrin and metalloproteinase domain-containing protein 10JBrowse
13406at6073Complete220.6121.0aint_s0458.g9.t1Zinc finger, RING-typeJBrowse
13408at6073Complete925.6515.0aint_s0332.g29.t1synaptic functional regulator FMR1-likeJBrowse
13432at6073Complete526.3269.0aint_s0362.g6.t1uncharacterized protein F13E9.13, mitochondrial-likeJBrowse
13439at6073Fragmented361.8192.0aint_s0124.g16.t1U3 small nucleolar RNA-interacting protein 2JBrowse
13441at6073Complete634.2422.0aint_s0212.g61.t1synaptotagmin-4-like isoform X1JBrowse
13458at6073Complete983.8440.0aint_s3159.g1.t1COP9 signalosome complex subunit 2JBrowse
13459at6073Complete330.0308.0aint_s0186.g2.t1uncharacterized protein LOC110049868JBrowse
13510at6073Fragmented951.6493.0aint_s0017.g61.t1vacuolar protein sorting-associated protein 51 homologJBrowse
13519at6073Complete372.0198.0aint_s0508.g11.t1COMM domain-containing protein 4JBrowse
13534at6073Complete510.3247.0aint_s0677.g6.t1CTD nuclear envelope phosphatase 1A-likeJBrowse
13554at6073Duplicated1556.51056.0aint_s0095.g43.t2beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1JBrowse
13554at6073Duplicated1556.31056.0aint_s0095.g43.t1beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1JBrowse
13602at6073Complete744.8440.0aint_s0055.g56.t1proline dehydrogenase 1, mitochondrial-likeJBrowse
13605at6073Complete421.8226.0aint_s0096.g40.t1Juxtaposed with another zinc finger protein 1JBrowse
13611at6073Complete499.3277.0aint_s0001.g165.t1lipoma-preferred partner homologJBrowse
13615at6073Complete2994.51474.0aint_s0064.g11.t1disco-interacting protein 2-likeJBrowse
13641at6073Complete513.3278.0aint_s0247.g32.t13-oxo-5-alpha-steroid 4-dehydrogenaseJBrowse
13665at6073Complete676.9423.0aint_s0095.g41.t1glucose-6-phosphate exchanger SLC37A4JBrowse
13757at6073Complete337.4209.0aint_s0272.g46.t1zinc finger FYVE domain-containing protein 21JBrowse
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