BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13160at6073Complete1343.1760.0alor_g5326.t1Tuftelin-interacting 11JBrowse
13196at6073Complete371.0207.0alor_g4169.t150S ribosomal protein L17JBrowse
13237at6073Complete378.3184.0alor_g20035.t1pre-mRNA-splicing factor SPF27-likeJBrowse
13295at6073Complete507.2304.0alor_g21598.t1zinc finger protein 367JBrowse
13296at6073Duplicated577.4299.0alor_g5665.t1Serine/threonine-protein phosphatase 2A activatorJBrowse
13296at6073Duplicated561.0299.0alor_g5665.t3Serine/threonine-protein phosphatase 2A activatorJBrowse
13314at6073Complete318.4233.0alor_g4462.t1elongation of very long chain fatty acids protein 4-likeJBrowse
13329at6073Complete475.5240.0alor_g3465.t1dihydropteridine reductase-likeJBrowse
13403at6073Fragmented411.1509.0alor_g20576.t1disintegrin and metalloproteinase domain-containing protein 10JBrowse
13406at6073Complete220.6121.0alor_g18539.t1Zinc finger, RING-typeJBrowse
13408at6073Complete849.2493.0alor_g14194.t1synaptic functional regulator FMR1-likeJBrowse
13432at6073Complete529.8269.0alor_g1880.t1uncharacterized protein F13E9.13, mitochondrial-likeJBrowse
13439at6073Complete718.0425.0alor_g13520.t1U3 small nucleolar RNA-interacting protein 2JBrowse
13441at6073Complete637.0422.0alor_g8883.t1synaptotagmin-4-like isoform X1JBrowse
13458at6073Complete983.8440.0alor_g1673.t1COP9 signalosome complex subunit 2JBrowse
13459at6073Complete329.4308.0alor_g20170.t1uncharacterized protein LOC110049868JBrowse
13510at6073Complete1503.8756.0alor_g9955.t1vacuolar protein sorting-associated protein 51 homologJBrowse
13519at6073Complete372.0198.0alor_g15759.t1COMM domain-containing protein 4JBrowse
13534at6073Complete511.3248.0alor_g24997.t1CTD nuclear envelope phosphatase 1A-likeJBrowse
13554at6073Complete1315.8961.0alor_g20637.t1beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1JBrowse
Go to page: of 167 pages
TOP