BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13033at6073Duplicated2345.71118.0amic_s0004.g141.t1phospholipid-transporting ATPase IA-likeJBrowse
13033at6073Duplicated2345.61117.0amic_s0004.g141.t2phospholipid-transporting ATPase IA-likeJBrowse
13042at6073Complete1094.6513.0amic_s0139.g36.t1E3 ubiquitin-protein ligase arih1-likeJBrowse
13067at6073Complete527.0269.0amic_s0080.g30.t1thioredoxin-like protein 1JBrowse
13093at6073Complete221.2150.0amic_s0331.g7.t1acyl carrier protein-likeJBrowse
13158at6073Fragmented462.5246.0amic_s0005.g69.t2Meiotic recombination protein dmc1JBrowse
13160at6073Complete1365.3691.0amic_s0099.g146.t1Tuftelin-interacting 11JBrowse
13196at6073Complete370.9207.0amic_s0066.g12.t150S ribosomal protein L17JBrowse
13295at6073Complete506.9304.0amic_s0036.g5.t1zinc finger protein 367JBrowse
13296at6073Complete572.2299.0amic_s0021.g179.t1Serine/threonine-protein phosphatase 2A activatorJBrowse
13314at6073Complete316.4233.0amic_s0124.g8.t1elongation of very long chain fatty acids protein 4-likeJBrowse
13329at6073Complete475.5240.0amic_s0058.g30.t1dihydropteridine reductase-likeJBrowse
13403at6073Complete1033.3657.0amic_s0224.g8.t1disintegrin and metalloproteinase domain-containing protein 10JBrowse
13406at6073Complete220.6121.0amic_s0101.g70.t1Zinc finger, RING-typeJBrowse
13408at6073Complete927.3515.0amic_s0176.g7.t1synaptic functional regulator FMR1-likeJBrowse
13432at6073Complete529.8269.0amic_s0112.g43.t1uncharacterized protein F13E9.13, mitochondrial-likeJBrowse
13439at6073Fragmented363.9194.0amic_s0324.g22.t2U3 small nucleolar RNA-interacting protein 2JBrowse
13441at6073Fragmented382.2281.0amic_s0149.g33.t1synaptotagmin-4-like isoform X1JBrowse
13458at6073Complete982.3440.0amic_s0059.g39.t1COP9 signalosome complex subunit 2JBrowse
13459at6073Complete332.0308.0amic_s0184.g2.t1uncharacterized protein LOC110049868JBrowse
Go to page: of 171 pages
TOP