BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8280at6073Duplicated328.4217.0XP_074623756.1uncharacterized protein LOC122947107JBrowse
8347at6073Complete1532.4905.0XP_074626105.1inositol polyphosphate 5-phosphatase OCRLJBrowse
8368at6073Duplicated1270.9688.0XP_074614448.1FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8368at6073Duplicated1261.5688.0XP_074614447.1FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8406at6073Duplicated614.0323.0XP_074620688.1palmitoyltransferase ZDHHC15B-likeJBrowse
8406at6073Duplicated532.9279.0XP_074620687.1palmitoyltransferase ZDHHC15B-likeJBrowse
8406at6073Duplicated527.3279.0XP_074620686.1palmitoyltransferase ZDHHC15B-likeJBrowse
8407at6073Complete783.7347.0XP_074635502.1Mitogen-activated kinase 1JBrowse
8414at6073Complete247.8158.0XP_074608415.1class E basic helix-loop-helix protein 22 isoform X1JBrowse
8465at6073Duplicated705.7343.0XP_074616127.1hepatocyte nuclear factor 4-gammaJBrowse
8465at6073Duplicated704.2341.0XP_074616128.1hepatocyte nuclear factor 4-gammaJBrowse
8465at6073Duplicated704.2341.0XP_074616129.1hepatocyte nuclear factor 4-gammaJBrowse
8465at6073Duplicated704.2341.0XP_074616130.1hepatocyte nuclear factor 4-gammaJBrowse
8465at6073Duplicated704.2341.0XP_074616131.1hepatocyte nuclear factor 4-gammaJBrowse
8477at6073Complete201.3135.0XP_074620290.1uncharacterized protein LOC116295621JBrowse
8488at6073Complete569.8343.0XP_074629707.1spermatogenesis-associated protein 17JBrowse
8515at6073Complete442.3247.0XP_074636040.1ras-related protein Rab-36JBrowse
8529at6073Complete746.8456.0XP_074621150.1ras association domain-containing protein 1JBrowse
8596at6073Duplicated205.0123.0XP_074613325.1eukaryotic translation initiation factor 4E-binding protein 1JBrowse
8596at6073Duplicated199.8123.0XP_074613326.1eukaryotic translation initiation factor 4E-binding protein 1JBrowse
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