BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14214at6073Complete980.1435.0pspe_0.1.m1.19227.m1SynaptotagminJBrowse
14256at6073Complete547.0344.0pspe_0.1.m1.51446.m1TAR DNA-binding protein 43JBrowse
14280at6073Complete362.7182.0pspe_0.1.m1.25907.m1malignant T-cell-amplified sequence 1JBrowse
14288at6073Fragmented428.9225.0pspe_0.1.m1.67555.m1nucleolar complex protein 4 homologJBrowse
14308at6073Complete363.9195.0pspe_0.1.m1.7186.m1thymocyte nuclear protein 1JBrowse
14320at6073Complete708.2456.0pspe_0.1.m1.70481.m1Usher syndrome type-1GJBrowse
14352at6073Complete801.7531.0pspe_0.1.m1.40884.m1uncharacterized protein LOC116307487JBrowse
14433at6073Complete730.7422.0pspe_0.1.m1.64237.m1vacuolar protein sorting-associated protein 4B-likeJBrowse
14442at6073Complete553.7351.0pspe_0.1.m1.28569.m1evolutionarily conserved signaling intermediate in Toll pathway, mitochondrialJBrowse
14459at6073Complete378.0228.0pspe_0.1.m1.62394.m1exosome complex component RRP43JBrowse
14502at6073Complete587.5406.0pspe_0.1.m1.20171.m1growth/differentiation factor 6-A-likeJBrowse
14507at6073Fragmented400.4273.0pspe_0.1.m1.47592.m1SynaptotagminJBrowse
14509at6073Fragmented1402.6763.0pspe_0.1.m1.36311.m1Fanconi anemia group JJBrowse
14517at6073Complete234.9110.0pspe_0.1.m1.12659.m1N-alpha-acetyltransferase 20JBrowse
14525at6073Complete1023.8488.0pspe_0.1.m1.41002.m1Aspartate--tRNA ligase, cytoplasmicJBrowse
14562at6073Complete410.1204.0pspe_0.1.m1.35478.m1ubiquitin-conjugating enzyme E2 SJBrowse
14574at6073Complete742.1404.0pspe_0.1.m1.19487.m1glucose-fructose oxidoreductase domain-containing protein 1JBrowse
14606at6073Complete949.4483.0pspe_0.1.m1.29421.m1uncharacterized protein LOC116289408JBrowse
14608at6073Complete571.8302.0pspe_0.1.m1.48967.m1ras-related GTP-binding protein AJBrowse
14620at6073Complete720.3381.0pspe_0.1.m1.15058.m1Terminal nucleotidyltransferase 5CJBrowse
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