BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 5,658 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77502at6073Duplicated446.2319.0g16198.t1.1Peptidyl-prolyl cis-trans isomeraseJBrowse
77505at6073Duplicated532.9569.0BRAKERIOWP00000006292.1HAUS augmin-like complex subunit 5JBrowse
77505at6073Duplicated532.9569.0g1016.t1.1HAUS augmin-like complex subunit 5JBrowse
77509at6073Duplicated775.31056.0BRAKERIOWP00000003729.1uncharacterized protein KIAA0825-likeJBrowse
77509at6073Duplicated775.31056.0g4237.t1.1uncharacterized protein KIAA0825-likeJBrowse
77510at6073Duplicated805.3642.0BRAKERIOWP00000009556.1trichohyalinJBrowse
77510at6073Duplicated805.3642.0g449.t1.1trichohyalinJBrowse
77513at6073Duplicated342.7293.0BRAKERIOWP00000007347.1replication stress response regulator SDE2JBrowse
77513at6073Duplicated342.7293.0g1104.t1.1replication stress response regulator SDE2JBrowse
77521at6073Duplicated422.2399.0BRAKERIOWP00000007834.1uncharacterized protein LOC114524962JBrowse
77521at6073Duplicated422.2399.0g14095.t1.1uncharacterized protein LOC114524962JBrowse
77527at6073Duplicated321.7279.0BRAKERIOWP00000003926.1protein FAM76A-likeJBrowse
77527at6073Duplicated321.7279.0g6297.t1.1protein FAM76A-likeJBrowse
77528at6073Fragmented369.7282.0BRAKERIOWP00000016986.1Leucine-rich repeat-containing protein 56JBrowse
77540at6073Duplicated553.7476.0BRAKERIOWP00000007021.1rhotekin-2-likeJBrowse
77540at6073Duplicated553.7476.0g14453.t1.1rhotekin-2-likeJBrowse
77545at6073Fragmented345.6254.0BRAKERIOWP00000012847.1alpha-tubulin N-acetyltransferaseJBrowse
77566at6073Duplicated336.6335.0BRAKERIOWP00000005728.1BUD13 homologJBrowse
77566at6073Duplicated336.6335.0g3898.t1.1BUD13 homologJBrowse
77571at6073Duplicated627.3753.0BRAKERIOWP00000009236.1ELKS/Rab6-interacting/CAST family member 1JBrowse
Go to page: of 283 pages
TOP