BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13842at6073Complete527.1351.0aint_s0128.g23.t1doublesex- and mab-3-related transcription factor A2JBrowse
13912at6073Complete375.7268.0aint_s0225.g25.t1RWD domain-containing protein 3JBrowse
13938at6073Complete1173.6579.0aint_s0300.g31.t1Very long-chain specific acyl-CoA dehydrogenase, mitochondrialJBrowse
13980at6073Duplicated390.1354.0aint_s0085.g33.t1lysine-specific demethylase 8-likeJBrowse
13980at6073Duplicated342.6334.0aint_s0046.g43.t1lysine-specific demethylase 8-likeJBrowse
13982at6073Complete548.9273.0aint_s0022.g67.t1autophagy protein 5-likeJBrowse
14048at6073Fragmented602.4424.0aint_s0214.g22.t1tyrosine-protein kinase RYK-likeJBrowse
14064at6073Complete627.7347.0aint_s0046.g66.t1prostaglandin reductase 2JBrowse
14069at6073Complete1254.4734.0aint_s0312.g40.t1Integrator complex subunit 10JBrowse
14083at6073Complete499.9287.0aint_s0149.g26.t1ELMO domain-containing protein 2JBrowse
14136at6073Complete643.8449.0aint_s0077.g7.t1golgin-45-likeJBrowse
14176at6073Complete379.1245.0aint_s0055.g10.t1Replication protein A 32 kDa subunitJBrowse
14194at6073Complete485.6422.0aint_s0022.g89.t1uncharacterized protein LOC116294854JBrowse
14214at6073Duplicated928.0432.0aint_s0016.g35.t2SynaptotagminJBrowse
14214at6073Duplicated848.3432.0aint_s0016.g35.t1SynaptotagminJBrowse
14256at6073Duplicated563.7343.0aint_s0035.g8.t2TAR DNA-binding protein 43JBrowse
14256at6073Duplicated557.8343.0aint_s0035.g8.t1TAR DNA-binding protein 43JBrowse
14280at6073Complete365.2182.0aint_s0280.g22.t1malignant T-cell-amplified sequence 1JBrowse
14288at6073Complete778.9492.0aint_s0116.g28.t1nucleolar complex protein 4 homologJBrowse
14308at6073Complete372.4172.0aint_s0469.g17.t1thymocyte nuclear protein 1JBrowse
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