BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8599at6073Duplicated549.0270.0XP_074639328.1Cytosolic Fe-S cluster assembly factor NUBP2JBrowse
8599at6073Duplicated549.0270.0XP_074639329.1Cytosolic Fe-S cluster assembly factor NUBP2JBrowse
8605at6073Complete1658.9820.0XP_074613707.1Thioredoxin domain-containing 12JBrowse
8658at6073Complete758.3450.0XP_074637810.1F-box only protein 47JBrowse
8674at6073Complete519.5282.0XP_074608461.1Solute carrier family 25 member 51JBrowse
8715at6073Duplicated267.9140.0XP_074630580.1AP-4 complex subunit sigma-1JBrowse
8715at6073Duplicated246.1129.0XP_074630579.1AP-4 complex subunit sigma-1JBrowse
8718at6073Duplicated1724.3975.0XP_074626976.1Ubiquitin conjugation factor E4 BJBrowse
8718at6073Duplicated1724.1975.0XP_074626975.1Ubiquitin conjugation factor E4 BJBrowse
8718at6073Duplicated1667.2879.0XP_074626977.1Ubiquitin conjugation factor E4 BJBrowse
8721at6073Complete888.3462.0XP_074638102.1N-acetylgalactosamine kinaseJBrowse
8749at6073Duplicated1055.5741.0XP_074624728.1epithelial discoidin domain-containing receptor 1JBrowse
8749at6073Duplicated1055.5741.0XP_074624729.1epithelial discoidin domain-containing receptor 1JBrowse
8749at6073Duplicated1055.5741.0XP_074624730.1epithelial discoidin domain-containing receptor 1JBrowse
8749at6073Duplicated1055.5741.0XP_074624731.1epithelial discoidin domain-containing receptor 1JBrowse
8749at6073Duplicated1055.5741.0XP_074624732.1epithelial discoidin domain-containing receptor 1JBrowse
8749at6073Duplicated1055.2741.0XP_074624726.1epithelial discoidin domain-containing receptor 1JBrowse
8749at6073Duplicated1055.2741.0XP_074624727.1epithelial discoidin domain-containing receptor 1JBrowse
8765at6073Complete653.9320.0XP_074610847.1transaldolaseJBrowse
8767at6073Complete2210.11088.0XP_074633725.1importin-5JBrowse
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