BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
13842at6073Complete528.8351.0FUN_016311-T1doublesex- and mab-3-related transcription factor A2JBrowse
13912at6073Complete265.5217.0FUN_004223-T1RWD domain-containing protein 3JBrowse
13938at6073Complete1177.6579.0FUN_041607-T1Very long-chain specific acyl-CoA dehydrogenase, mitochondrialJBrowse
13980at6073Duplicated616.8371.0FUN_005349-T1lysine-specific demethylase 8-likeJBrowse
13980at6073Duplicated578.1326.0FUN_005349-T2lysine-specific demethylase 8-likeJBrowse
13982at6073Fragmented415.7194.0FUN_043531-T1autophagy protein 5-likeJBrowse
14048at6073Complete950.5665.0FUN_004851-T1tyrosine-protein kinase RYK-likeJBrowse
14064at6073Complete627.7347.0FUN_012363-T1prostaglandin reductase 2JBrowse
14069at6073Duplicated1257.9735.0FUN_041731-T1Integrator complex subunit 10JBrowse
14069at6073Duplicated1109.4660.0FUN_041731-T2Integrator complex subunit 10JBrowse
14083at6073Complete500.1287.0FUN_006330-T1ELMO domain-containing protein 2JBrowse
14136at6073Complete634.4449.0FUN_041929-T1golgin-45-likeJBrowse
14176at6073Complete379.9245.0FUN_014793-T1Replication protein A 32 kDa subunitJBrowse
14205at6073Complete300.3165.0FUN_007056-T139S ribosomal protein L22, mitochondrial-likeJBrowse
14214at6073Complete848.3432.0FUN_030679-T1SynaptotagminJBrowse
14256at6073Complete454.6297.0FUN_013553-T1TAR DNA-binding protein 43JBrowse
14280at6073Complete365.5182.0FUN_006732-T1malignant T-cell-amplified sequence 1JBrowse
14288at6073Complete777.7494.0FUN_004286-T1nucleolar complex protein 4 homologJBrowse
14308at6073Complete376.4195.0FUN_000876-T1thymocyte nuclear protein 1JBrowse
14320at6073Duplicated707.2456.0FUN_038254-T1Usher syndrome type-1GJBrowse
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