BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
8010at6073Duplicated818.7660.0g5092.t1.13-hydroxy-3-methylglutaryl-coenzyme A reductaseJBrowse
8063at6073Duplicated1829.91207.0BRAKERHOCP00005018337.1vigilin-likeJBrowse
8063at6073Duplicated1829.91207.0g9348.t1.1vigilin-likeJBrowse
8095at6073Duplicated191.7127.0BRAKERHOCP00005013543.1mediator of RNA polymerase II transcription subunit 22JBrowse
8095at6073Duplicated191.7127.0g19985.t1.1mediator of RNA polymerase II transcription subunit 22JBrowse
8171at6073Duplicated175.9107.0BRAKERHOCP00005014722.1mitochondrial pyruvate carrier 2JBrowse
8171at6073Duplicated175.9107.0g16869.t1.1mitochondrial pyruvate carrier 2JBrowse
8257at6073Duplicated1412.7738.0BRAKERHOCP00005020362.1Cullin-3JBrowse
8257at6073Duplicated1412.7738.0g8156.t1.1Cullin-3JBrowse
8280at6073Duplicated220.4186.0BRAKERHOCP00005011566.1uncharacterized protein LOC122947107JBrowse
8280at6073Duplicated220.4186.0g14497.t1.1uncharacterized protein LOC122947107JBrowse
8347at6073Fragmented1136.9721.0BRAKERHOCP00005014702.1inositol polyphosphate 5-phosphatase OCRLJBrowse
8368at6073Duplicated937.4672.0BRAKERHOCP00005017286.1FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8368at6073Duplicated937.4672.0g1554.t1.1FHF complex subunit HOOK interacting protein 2A-likeJBrowse
8406at6073Duplicated485.8299.0BRAKERHOCP00005009135.1palmitoyltransferase ZDHHC15B-likeJBrowse
8406at6073Duplicated485.8299.0g2422.t1.1palmitoyltransferase ZDHHC15B-likeJBrowse
8407at6073Duplicated715.9345.0BRAKERHOCP00005013529.1Mitogen-activated kinase 1JBrowse
8407at6073Duplicated715.9345.0g19537.t1.1Mitogen-activated kinase 1JBrowse
8414at6073Duplicated123.8146.0BRAKERHOCP00005005887.1class E basic helix-loop-helix protein 22 isoform X1JBrowse
8414at6073Duplicated123.8146.0g12121.t1.1class E basic helix-loop-helix protein 22 isoform X1JBrowse
Go to page: of 262 pages
TOP