BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
14673at6073Complete1402.4946.0pspe_0.1.m1.19254.m1nuclear pore complex protein Nup133-likeJBrowse
14741at6073Complete459.2234.0pspe_0.1.m1.26820.m1Eukaryotic translation initiation factor 4E type 2JBrowse
14751at6073Complete935.4454.0pspe_0.1.m1.40500.m1Golgi pH regulator AJBrowse
14768at6073Complete755.6508.0pspe_0.1.m1.64345.m1protein FAM214A-likeJBrowse
14781at6073Complete1133.4571.0pspe_0.1.m1.52371.m160 kDa heat shock protein, mitochondrialJBrowse
14810at6073Complete230.2114.0pspe_0.1.m1.63588.m160S ribosomal protein L34JBrowse
14816at6073Complete283.3223.0pspe_0.1.m1.18171.m1kinetochore protein Spc25-likeJBrowse
14845at6073Complete345.4222.0pspe_0.1.m1.53406.m1Ribosomal RNA-processing protein 7 AJBrowse
14896at6073Complete395.9233.0pspe_0.1.m1.25520.m1lysosomal-associated transmembrane 4A-likeJBrowse
14913at6073Complete437.0218.0pspe_0.1.m1.49709.m1protein C9orf135JBrowse
14925at6073Complete547.4260.0pspe_0.1.m1.15930.m160S ribosomal protein L7a-likeJBrowse
14968at6073Complete386.5191.0pspe_0.1.m1.35455.m1B9 domain-containing 1JBrowse
15013at6073Complete476.9290.0pspe_0.1.m1.43795.m1Cyclin-like domainJBrowse
15026at6073Complete655.6381.0pspe_0.1.m1.65482.m1DUF21 domain-containing protein At4g33700-likeJBrowse
15044at6073Complete637.5333.0pspe_0.1.m1.32005.m1Isocitrate dehydrogenase JBrowse
15093at6073Complete570.2356.0pspe_0.1.m1.23485.m1rho GTPase-activating syd-1-likeJBrowse
15136at6073Complete1071.3514.0pspe_0.1.m1.26916.m1U4/U6 small nuclear ribonucleoprotein Prp4-likeJBrowse
15162at6073Complete192.1108.0pspe_0.1.m1.44709.m1eukaryotic translation initiation factor 1JBrowse
15222at6073Fragmented488.2311.0pspe_0.1.m1.71273.m1GTPase HflX, N-terminalJBrowse
15248at6073Complete454.0221.0pspe_0.1.m1.53012.m1vesicle-associated membrane protein 7JBrowse
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