BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
12845at6073Fragmented259.8128.0CAB4022479.1protein YIPF1-likeJBrowse
12900at6073Complete419.4388.0CAB3997014.1uncharacterized protein LOC122946992JBrowse
12912at6073Duplicated1746.5851.0CAB3998662.1coatomer subunit betaJBrowse
12912at6073Duplicated1740.1845.0CAB3998663.1coatomer subunit betaJBrowse
12919at6073Complete451.7271.0CAB3998250.1protein-S-isoprenylcysteine O-methyltransferase-likeJBrowse
12980at6073Complete855.2746.0CAB3991893.1uncharacterized protein LOC114955734 isoform X1JBrowse
12994at6073Complete577.5310.0CAB3981682.1ribose-phosphate pyrophosphokinase 4JBrowse
13010at6073Complete238.2215.0CAB4022290.1transcription cofactor vestigial-like protein 4JBrowse
13022at6073Fragmented893.9469.0CAB3981845.1DNA (cytosine-5)-methyltransferase 3AJBrowse
13033at6073Fragmented1706.7831.0CAB3980491.1phospholipid-transporting ATPase IA-likeJBrowse
13037at6073Complete570.2292.0CAB3982926.14-hydroxy-2-oxoglutarate aldolase, mitochondrial-likeJBrowse
13042at6073Complete976.8512.0CAB4004373.1E3 ubiquitin-protein ligase arih1-likeJBrowse
13067at6073Complete498.9288.0CAB4015203.1thioredoxin-like protein 1JBrowse
13093at6073Complete216.7150.0CAB4002899.1acyl carrier protein-likeJBrowse
13158at6073Complete676.3308.0CAB3994358.1Meiotic recombination protein dmc1JBrowse
13160at6073Fragmented959.7547.0CAB4002377.1Tuftelin-interacting 11JBrowse
13196at6073Complete352.5225.0CAB3984217.150S ribosomal protein L17JBrowse
13237at6073Fragmented250.9128.0CAB3978094.1pre-mRNA-splicing factor SPF27-likeJBrowse
13295at6073Complete433.1303.0CAB4007515.1zinc finger protein 367JBrowse
13296at6073Complete543.2299.0CAB3982536.1Serine/threonine-protein phosphatase 2A activatorJBrowse
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