Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.
Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%
| Complete (C = S + D) | Single-copy (S) | Duplicated (D) | Fragmented (F) | Missing (M) |
|---|---|---|---|---|
| 2,487 (77.6%) | 2,400 (74.9%) | 87 (2.7%) | 376 (11.7%) | 340 (10.6%) |
A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.
Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.
| Busco ID | Status | Score | Length | Gene ID | Description | Visualization |
|---|---|---|---|---|---|---|
| 15514at6073 | Complete | 460.8 | 315 | BRAKERIOWP00000008145.1 | L-serine dehydratase/L-threonine deaminase-like | JBrowse |
| 15518at6073 | Complete | 387.1 | 298 | BRAKERIOWP00000008591.1 | 17-beta-hydroxysteroid dehydrogenase 13 | JBrowse |
| 15583at6073 | Complete | 779.7 | 649 | BRAKERIOWP00000020673.1 | mucosa-associated lymphoid tissue lymphoma translocation protein 1 | JBrowse |
| 15592at6073 | Complete | 313.8 | 338 | BRAKERIOWP00000017830.1 | Proline-rich AKT1 substrate 1 | JBrowse |
| 15596at6073 | Complete | 576.2 | 497 | BRAKERIOWP00000014507.1 | G patch domain-containing protein 3 | JBrowse |
| 15604at6073 | Complete | 477.7 | 385 | BRAKERIOWP00000009449.1 | sprT-like domain-containing protein Spartan | JBrowse |
| 15702at6073 | Complete | 745.9 | 395 | BRAKERIOWP00000001271.1 | Acid-sensing ion channel 2 | JBrowse |
| 15713at6073 | Complete | 252.6 | 195 | BRAKERIOWP00000002795.1 | mitotic spindle assembly checkpoint protein MAD2B-like | JBrowse |
| 15834at6073 | Complete | 287.0 | 302 | BRAKERIOWP00000006281.1 | ubiquitin-conjugating enzyme E2 U-like | JBrowse |
| 15842at6073 | Complete | 1001.9 | 589 | BRAKERIOWP00000008536.1 | cAMP-specific 3',5'-cyclic phosphodiesterase 4C-like | JBrowse |
| 15844at6073 | Complete | 712.0 | 431 | BRAKERIOWP00000007048.1 | uncharacterized protein LOC110233383 isoform X1 | JBrowse |
| 15944at6073 | Complete | 635.6 | 341 | BRAKERIOWP00000010446.1 | cyclin-dependent kinase 20 | JBrowse |
| 15948at6073 | Complete | 763.5 | 690 | BRAKERIOWP00000016884.1 | leucine-rich repeat and guanylate kinase domain-containing protein | JBrowse |
| 15954at6073 | Complete | 166.8 | 174 | BRAKERIOWP00000002940.1 | BLOC-1-related complex subunit 5 | JBrowse |
| 15990at6073 | Complete | 509.0 | 351 | BRAKERIOWP00000001323.1 | RNA 3 -terminal phosphate cyclase | JBrowse |
| 16004at6073 | Complete | 1284.1 | 855 | BRAKERIOWP00000013175.1 | nuclear pore complex protein Nup107-like | JBrowse |
| 16097at6073 | Complete | 492.9 | 330 | BRAKERIOWP00000002409.1 | aldose 1-epimerase | JBrowse |
| 16115at6073 | Complete | 1130.1 | 590 | BRAKERIOWP00000013769.1 | ATP-binding cassette sub-family B member 7, mitochondrial | JBrowse |
| 16189at6073 | Complete | 1212.8 | 753 | BRAKERIOWP00000006262.1 | E3 ubiquitin-protein ligase trim71 | JBrowse |
| 16197at6073 | Complete | 636.8 | 644 | BRAKERIOWP00000010206.1 | anillin | JBrowse |
