BUSCO Gene Details

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
980at6073Duplicated234.4113.0aint_s0169.g40.t1mediator of RNA polymerase II transcription subunit 31JBrowse
1001at6073Fragmented221.0131.0aint_s0191.g8.t1pirin-like proteinJBrowse
1029at6073Complete1204.5657.0aint_s0071.g49.t1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1030at6073Fragmented614.3334.0aint_s0031.g29.t1lysine-specific demethylase 8-likeJBrowse
1053at6073Complete586.4287.0aint_s0322.g6.t1Endoplasmic reticulum-Golgi intermediate compartment protein 1JBrowse
1118at6073Complete478.6286.0aint_s0516.g13.t1embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein-likeJBrowse
1137at6073Complete519.2302.0aint_s0061.g65.t1Dual specificity protein phosphatase 10JBrowse
1154at6073Complete249.9146.0aint_s0037.g71.t1Transmembrane protein 72JBrowse
1182at6073Complete964.1450.0aint_s0002.g98.t1Serine/threonine-protein kinase 38JBrowse
1204at6073Fragmented202.9104.0aint_s0077.g74.t1trafficking protein particle complex subunit 1JBrowse
1219at6073Duplicated787.7361.0aint_s0212.g41.t1COUP transcription factor 2-likeJBrowse
1219at6073Duplicated780.7361.0aint_s0212.g41.t2COUP transcription factor 2-likeJBrowse
1240at6073Complete602.1467.0aint_s0039.g79.t1uncharacterized protein LOC110041196 isoform X1JBrowse
1244at6073Complete784.4426.0aint_s0020.g106.t1DENN domain-containing protein 11-likeJBrowse
1254at6073Complete263.6160.0aint_s0295.g4.t1succinate dehydrogenase JBrowse
1341at6073Complete493.7216.0aint_s0067.g5.t1Ras-related protein Rab-14JBrowse
1342at6073Complete379.3191.0aint_s0051.g91.t1protein N-terminal glutamine amidohydrolaseJBrowse
1358at6073Complete908.7393.0aint_s0293.g18.t1actin-related protein 2JBrowse
1360at6073Complete234.4135.0aint_s0007.g40.t1NTF2-related export protein 1JBrowse
1370at6073Complete570.9279.0aint_s0128.g18.t1homeobox protein six1-likeJBrowse
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