BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
686at6073Duplicated1333.7958.0XP_074623847.1reversion-inducing cysteine-rich protein with Kazal motifs-likeJBrowse
757at6073Complete283.8203.0XP_074637456.12-aminoethanethiol dioxygenase-likeJBrowse
765at6073Complete471.2341.0XP_074607223.1zinc finger Y-chromosomal 2-likeJBrowse
781at6073Complete493.3215.0XP_074618924.1MOB kinase activator 1BJBrowse
788at6073Complete1269.8623.0XP_074618272.1protein arginine N-methyltransferase 5JBrowse
810at6073Complete915.8506.0XP_074617902.1membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinaseJBrowse
837at6073Complete384.4178.0XP_074622535.1ADP-ribosylation factor-like protein 5BJBrowse
916at6073Duplicated893.0487.0XP_074633687.1Alpha-(1,3)-fucosyltransferase 11JBrowse
916at6073Duplicated893.0487.0XP_074633688.1Alpha-(1,3)-fucosyltransferase 11JBrowse
916at6073Duplicated893.0487.0XP_074633689.1Alpha-(1,3)-fucosyltransferase 11JBrowse
932at6073Complete484.0242.0XP_074617122.1tRNA (guanine-N(7)-)-methyltransferaseJBrowse
935at6073Complete296.0153.0XP_074624022.1ORM1-like protein 1JBrowse
970at6073Complete1174.2575.0XP_074639266.1alkyldihydroxyacetonephosphate synthase, peroxisomal-likeJBrowse
980at6073Complete234.9113.0XP_074637475.1mediator of RNA polymerase II transcription subunit 31JBrowse
1001at6073Complete611.2308.0XP_074625622.1pirin-like proteinJBrowse
1029at6073Duplicated1223.4664.0XP_074607457.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1029at6073Duplicated1206.9655.0XP_074607455.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1029at6073Duplicated1150.8624.0XP_074607456.1polyunsaturated fatty acid 5-lipoxygenase-likeJBrowse
1030at6073Complete800.1428.0XP_074629264.1lysine-specific demethylase 8-likeJBrowse
1053at6073Complete586.7287.0XP_074614259.1Endoplasmic reticulum-Golgi intermediate compartment protein 1JBrowse
Go to page: of 238 pages
TOP