BUSCO Gene Details in Aurelia aurita complex sp. Pacific

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Aurelia aurita complex sp. PacificBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 34.5% [S: 28.5%, D: 6.0%] F: 16.1%, M: 49.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
1,104 (34.5%)912 (28.5%)192 (6.0%)515 (16.1%)1,584 (49.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Aurelia aurita complex sp. Pacific: 1,878 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
1580at6073Duplicated523.9324dual specificity mitogen-activated protein kinase kinase 4JBrowse
1580at6073Duplicated487.9303dual specificity mitogen-activated protein kinase kinase 4JBrowse
1580at6073Duplicated487.4301dual specificity mitogen-activated protein kinase kinase 4JBrowse
1599at6073Duplicated557.2335WD repeat domain phosphoinositide-interacting protein 4JBrowse
1599at6073Duplicated490.5287WD repeat domain phosphoinositide-interacting protein 4JBrowse
1622at6073Complete652.4417mannose-1-phosphate guanyltransferase alphaJBrowse
1630at6073Fragmented253.1169DNA excision repair protein ERCC-8JBrowse
1672at6073Complete1293.8725DNA topoisomerase 3-beta-1JBrowse
1748at6073Complete409.6223Succinate dehydrogenaseJBrowse
1859at6073Complete194.0151uncharacterized protein C16orf52 homologJBrowse
1920at6073Duplicated567.4292kidney mitochondrial carrier protein 1JBrowse
1920at6073Duplicated528.5292kidney mitochondrial carrier protein 1JBrowse
1944at6073Complete634.1350mitogen-activated protein kinase 14JBrowse
1962at6073Complete138.191SH3 domain-binding glutamic acid-rich 3JBrowse
2020at6073Complete320.1205DNA replication complex GINS protein PSF3-likeJBrowse
2052at6073Fragmented189.4111mitochondrial inner membrane protease ATP23JBrowse
2093at6073Fragmented454.0368protein O-glucosyltransferase 2JBrowse
2197at6073Fragmented205.0186protein FAM228BJBrowse
2281at6073Complete166.0176Dynein heavy chain AAA lid domainJBrowse
2297at6073Complete882.2430adenosylhomocysteinase AJBrowse
Go to page: of 94 pages
TOP